Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1023 113 1e-19
seq721 109 1e-18
seq923 107 4e-18
seq189 96.9 8e-15
>seq1023
Length=175318
Score = 113 bits (124), Expect = 1e-19
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| ||| || || | ||||| ||||||||||| || ||||||||
Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138068
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || |||||||| || |||||||| || ||||| || || || ||||||||| ||
Sbjct 138067 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 138008
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|||||||| ||| || || || ||||||| ||||| || |||| || || |||
Sbjct 138007 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 137951
Query 195130 AA 195131
||
Sbjct 137950 AA 137949
>seq721
Length=8534
Score = 109 bits (120), Expect = 1e-18
Identities = 189/275 (69%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646
|||||||||| | ||||| ||||||| ||||||||| | || | | ||| || || |
Sbjct 5335 TTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACT 5394
Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706
||| || ||||| |||||||| || ||||| || | |||||| || ||| |||||||
Sbjct 5395 GGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCG 5454
Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAG 160766
|| |||| || | | ||||| | ||||| | | | ||| | | ||||| ||
Sbjct 5455 AGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCATCAAGGCTCAGA 5514
Query 160767 AACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACA 160826
| || ||| | ||| || | ||||| ||| |||| ||||| || ||||
Sbjct 5515 AGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACA 5574
Query 160827 AGGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861
||||||| | ||||||||||||||||||
Sbjct 5575 AGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 5609
>seq923
Length=14999
Score = 107 bits (118), Expect = 4e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || |||||||| | |||||| | || || |||
Sbjct 11542 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCG 11483
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||||||||| |||||||| | ||||||||||| || ||||| || || ||||||
Sbjct 11482 AGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTCT 11426
>seq189
Length=53202
Score = 96.9 bits (106), Expect = 8e-15
Identities = 132/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| | || ||||||||||| || || || || || || | || || | || || ||
Sbjct 52961 ACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCS 52902
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| | || || ||||| || |||||||| || ||||| ||
Sbjct 52901 AGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGG 52842
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| ||| ||| || || || ||||| | | | || || || |||||||| | ||||
Sbjct 52841 ATCTTTGACTTSACRTTGTCGATGGTATCGCTGGAC--TCAACCTCAAGGGTGATGGTCT 52784
Query 195110 TTCCTGT 195116
| || ||
Sbjct 52783 TGCCAGT 52777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109464996607856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |