Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq190 91.5 1e-13 >seq190 Length=431 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||| | |||| ||| ||||| ||||| || || ||||| | || |||| || ||||| Sbjct 267 GTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTG 208 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||||||||| || || ||||||||||| | || | |||||||| || |||||| Sbjct 207 CTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTT 148 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 || || || ||||||| || | ||| || || | || || || || | Sbjct 147 GGACTTCAC--AT--TATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGC 92 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| ||||| || || ||||||||| Sbjct 91 CGGTGAGTGTCTTGACGAAAATCTGCATA 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628978840704