Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq189 87.8 1e-12
>seq189
Length=53202
Score = 87.8 bits (96), Expect = 1e-12
Identities = 97/134 (72%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || || | |||| || || ||| ||| || || || || || || ||
Sbjct 52979 CCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGAC 52920
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | ||| |||| || | |||||| |||||||| |||| ||||| || || | ||||
Sbjct 52919 AGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGA 52860
Query 48660 ACGCCCTCCTTGTC 48673
| ||||||||||||
Sbjct 52859 ATGCCCTCCTTGTC 52846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380932177353264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |