Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq927 125 9e-23 seq721 120 4e-21 seq742 113 6e-19 seq161 105 8e-17 seq942 93.3 5e-13 >seq927 Length=85386 Score = 125 bits (138), Expect = 9e-23 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||||| |||||||||||||| | | ||||| Sbjct 52251 GCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATG 52192 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 52191 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 52132 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| ||||||| |||||| || |||||||||||| | Sbjct 52131 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC 52072 Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || ||| | || || | || | | ||||| | |||||| |||| |||||||| || Sbjct 52071 AG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAAT 52013 Query 868930 GAT 868932 ||| Sbjct 52012 GAT 52010 >seq721 Length=8534 Score = 120 bits (132), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448 ||||| || ||||| || || ||||||| |||||| || || | | |||| | Sbjct 5428 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 5369 Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508 || ||||| || |||||||| ||||| || ||||| || || || ||||||||| Sbjct 5368 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 5309 Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 ||||| ||||| || ||||| | |||| | |||||||||||||||||||||||| Sbjct 5308 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 5249 Query 1628569 CAGGCAAAGGCGCCCTTGCGCTTG 1628592 ||||||||| || ||||||| Sbjct 5248 ATGGCAAAGGCACCGGGGCGCTTG 5225 >seq742 Length=92682 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || |||||| | || || || | || ||||| | || |||||| Sbjct 14030 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 14089 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || || |||||||||||||||||||| |||||| || ||| Sbjct 14090 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 14144 >seq161 Length=151067 Score = 105 bits (116), Expect = 8e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || |||||| ||||||||||| | || || || ||| Sbjct 24426 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCTGTGGGACTAGGTGAG 24485 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 24486 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 24545 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||||| ||| ||| || Sbjct 24546 AAGGGCTTCGAGATCGGCTCCGGCTT 24571 Score = 91.5 bits (100), Expect = 2e-12 Identities = 215/320 (67%), Gaps = 10/320 (3%) Strand=Plus/Plus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||||||| | || | |||||||||||| |||| || || ||| | || Sbjct 23740 TGGCGAGTCGCAC-TGTCGCTCTGTCGGCTGCATCGTCGATGGATGTCCTCCGGGATTGG 23798 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 ||| ||||||||||||| ||||| || || |||||||| || ||||| |||| | Sbjct 23799 AACTCACCGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCTGGCCAAAGCGCTC 23858 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 | | || ||||| | ||| || || ||| |||||||| ||||| ||| ||| Sbjct 23859 TCACTACCCCGCGGGATGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGTA 23918 Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337 |||| || || | || | | | | | || ||| |||||||| ||| |||| Sbjct 23919 TCACTCTTGGTACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGCCCCAAGGACT 23978 Query 18338 ATTCCGACATGTGCAAGG----TG---CCGCGGCCCTCACACGCCGACTACACCTACATG 18390 | || || | ||| | || || || || || ||||||| ||||||| | Sbjct 23979 ACGGCGGCA-GCACAATGGACCTGTACCCTCGCCCTAGCCATGCCGACTTCACCTACCTT 24037 Query 18391 GCCAAGTACGGCATCAAGGC 18410 | ||||||||| ||||||| Sbjct 24038 GAGAAGTACGGCGTCAAGGC 24057 >seq942 Length=79584 Score = 93.3 bits (102), Expect = 5e-13 Identities = 241/365 (66%), Gaps = 3/365 (1%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | ||| || | || | || | | || ||||||||| Sbjct 25971 TGGGGGTGCGAGGCGGCGCCGATGGCATCCACGGCAACGGTCAGGTTGCCATCGGTGCCG 26030 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| || | ||||||||||| ||| |||| Sbjct 26031 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGCAGCTGAGACTCG 26090 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGCCACCAGA 1726864 || ||||| ||||| | ||||| || | || || || | || | | | Sbjct 26091 GTGGTGCGGGCGCCGATTGCGCCGAGCGAAATCAAATCCGCTAGGTACTGTGGGGAGATG 26150 Query 1726865 GGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGG 1726924 | | || | ||| ||| | |||| | | || || | |||||| |||| Sbjct 26151 GTATCTAGCATCTCTGAGGCAATGGGCAGGCC--CGTGCTCGTC-AGATCGGTGTACAGC 26207 Query 1726925 CGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTG 1726984 || ||| | ||| || | | | | | | | | |||||| |||||||||| || Sbjct 26208 TTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGTCGTTG 26267 Query 1726985 GCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACG 1727044 || ||||||||| ||||| || ||||| |||||||| | ||||||||||||| |||| Sbjct 26268 ATCAAGCCCTTCCAGCCGACCGTTGTGCGGGGCTTTTCCAGGTAGGCGCGCATGATCACG 26327 Query 1727045 CAAAG 1727049 || || Sbjct 26328 CAGAG 26332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107043348450256