Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq190 105 6e-18
seq189 93.3 4e-14
>seq190
Length=431
Score = 105 bits (116), Expect = 6e-18
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || ||||| || || ||||| || | ||
Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| ||||| || || || || || || || ||
Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|||||| | ||||||||||| || ||||| |||||| ||| | || | || ||||| |
Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCG-CACAC-TTTCCGATTACA 241
Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907
|||| || |||||||| ||||| |||
Sbjct 242 ACATCCAGAAGGAATCCACACTCCAC 267
>seq189
Length=53202
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || || || || || || || || || ||| ||| || | || | || || |
Sbjct 52777 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYGTSAAGTCA 52836
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || || ||||||||||||||||| ||
Sbjct 52837 AAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGMAAG 52896
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| ||||| | | |||| || |||||||| || || || || || || ||
Sbjct 52897 CAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCACTCTMCAY 52956
Query 24908 TTGGT 24912
||||
Sbjct 52957 YTGGT 52961
Score = 86.0 bits (94), Expect = 6e-12
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || ||||| || || || || || || || || | | ||| || | || |
Sbjct 53054 AAGACCCTGACCGGAAAGACCATYACCCTTGAGGTTGAGTCYAGCGATACCATCGACAAY 53113
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || ||||||||| ||||| || || || || || || || || ||||||||||||
Sbjct 53114 GTSAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATCTTT 53173
Query 24839 GCCGGGAAACAGCTGGAGGA 24858
||||| || |||||||||||
Sbjct 53174 GCCGGMAAGCAGCTGGAGGA 53193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449891031495040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |