Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq190 105 6e-18 seq189 93.3 4e-14 >seq190 Length=431 Score = 105 bits (116), Expect = 6e-18 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || ||||| || || ||||| || | || Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| ||||| || || || || || || || || Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | ||||||||||| || ||||| |||||| ||| | || | || ||||| | Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCG-CACAC-TTTCCGATTACA 241 Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907 |||| || |||||||| ||||| ||| Sbjct 242 ACATCCAGAAGGAATCCACACTCCAC 267 >seq189 Length=53202 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || || || || || || || || || ||| ||| || | || | || || | Sbjct 52777 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYGTSAAGTCA 52836 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || || ||||||||||||||||| || Sbjct 52837 AAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGMAAG 52896 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| | | |||| || |||||||| || || || || || || || Sbjct 52897 CAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCACTCTMCAY 52956 Query 24908 TTGGT 24912 |||| Sbjct 52957 YTGGT 52961 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || || || || || || || || | | ||| || | || | Sbjct 53054 AAGACCCTGACCGGAAAGACCATYACCCTTGAGGTTGAGTCYAGCGATACCATCGACAAY 53113 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||||||| ||||| || || || || || || || || |||||||||||| Sbjct 53114 GTSAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATCTTT 53173 Query 24839 GCCGGGAAACAGCTGGAGGA 24858 ||||| || ||||||||||| Sbjct 53174 GCCGGMAAGCAGCTGGAGGA 53193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891031495040