Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq927 140 3e-28
seq1023 107 2e-18
seq190 98.7 1e-15
seq189 93.3 4e-14
>seq927
Length=85386
Score = 140 bits (154), Expect = 3e-28
Identities = 343/512 (67%), Gaps = 25/512 (5%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| || || || || ||||| || ||||| ||| || ||| |
Sbjct 52246 CTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTC 52187
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | ||||| |||| ||| | ||| | || |||||
Sbjct 52186 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 52127
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || || |||||||||||||||||||| || ||||||||||| ||| | ||
Sbjct 52126 GCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC-AGGC 52068
Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
| | || || || | |||| ||||||| ||| || | || ||||| || |||
Sbjct 52067 CGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTC---GACAATG- 52012
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCG--CGTTC----GGTAGTA---CA 120640
||| | | || |||| | ||| ||| |||| || || | ||
Sbjct 52011 -----ATA---TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCA 51960
Query 120641 GGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCA 120700
| || |||||||| ||||| || ||||| || || || |||| ||||||| || || |
Sbjct 51959 GACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGA 51900
Query 120701 GGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760
| || ||||| | ||| | |||| | |||| |||| ||| || ||| || ||||
Sbjct 51899 GACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGA 51840
Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-G 120819
| | |||||||| ||| ||||| |||| ||| || || || | | || | | |
Sbjct 51839 AGATACCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGGTTGAC-TCACGGTCG 51781
Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851
| |||||| | |||||| | |||||| ||
Sbjct 51780 TTGATCCAGCGGAGGGCCCAGTTGGCCTTCTT 51749
>seq1023
Length=175318
Score = 107 bits (118), Expect = 2e-18
Identities = 134/181 (74%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| |||| || ||| | | | ||||||||||||||||| ||| | ||
Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 138069
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||| ||||| || || ||||| |||||||| |||||| ||||| | ||
Sbjct 138068 CAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 138009
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||| | | ||| || |||| ||| | ||| || || ||||| || || |||||
Sbjct 138008 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 137949
Query 133652 A 133652
|
Sbjct 137948 A 137948
>seq190
Length=431
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || ||||||||| | ||| ||| | ||||| |||||||| ||
Sbjct 260 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCA-TCCTCAAGCTGCTTTCC 202
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| || |||||||| || || ||||| ||||| || ||||| |||
Sbjct 201 GGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTT 142
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || |||| | ||| || || | |||| || |||||||| || ||
Sbjct 141 CACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGT 82
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 81 CTTGACGAAAATCTGCAT 64
>seq189
Length=53202
Score = 93.3 bits (102), Expect = 4e-14
Identities = 124/175 (71%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || || || || || | | ||| |||||| |||||||| |
Sbjct 52949 GTGGACTCYTTCTGGATGTTATAGTCRGACA--GKGTRCGACCGTCCTCSAGCTGCTTKC 52892
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || | ||||||||||| || || ||||| |||||||| ||||||| ||
Sbjct 52891 CGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACT 52832
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
| | | || | || ||| ||| ||| || || | ||||| ||| ||||| ||
Sbjct 52831 TSACRTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 52777
Score = 86.0 bits (94), Expect = 6e-12
Identities = 105/146 (72%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||| |||||||| || || | || | ||||||||||| || || ||||| |||||
Sbjct 53194 GTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTT 53135
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| ||||||| ||| | | || | || ||| | | ||| || || | ||| |
Sbjct 53134 GTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTRAT 53075
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGA 133650
||| || |||||||| || || ||||
Sbjct 53074 GGTCTTTCCGGTCAGGGTCTTGACGA 53049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483413742056320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |