Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq927 140 3e-28 seq1023 107 2e-18 seq190 98.7 1e-15 seq189 93.3 4e-14 >seq927 Length=85386 Score = 140 bits (154), Expect = 3e-28 Identities = 343/512 (67%), Gaps = 25/512 (5%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || || || || ||||| || ||||| ||| || ||| | Sbjct 52246 CTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTC 52187 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 52186 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 52127 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || |||||||||||||||||||| || ||||||||||| ||| | || Sbjct 52126 GCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC-AGGC 52068 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | | || || || | |||| ||||||| ||| || | || ||||| || ||| Sbjct 52067 CGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTC---GACAATG- 52012 Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCG--CGTTC----GGTAGTA---CA 120640 ||| | | || |||| | ||| ||| |||| || || | || Sbjct 52011 -----ATA---TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCA 51960 Query 120641 GGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCA 120700 | || |||||||| ||||| || ||||| || || || |||| ||||||| || || | Sbjct 51959 GACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGA 51900 Query 120701 GGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760 | || ||||| | ||| | |||| | |||| |||| ||| || ||| || |||| Sbjct 51899 GACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGA 51840 Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-G 120819 | | |||||||| ||| ||||| |||| ||| || || || | | || | | | Sbjct 51839 AGATACCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGGTTGAC-TCACGGTCG 51781 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 | |||||| | |||||| | |||||| || Sbjct 51780 TTGATCCAGCGGAGGGCCCAGTTGGCCTTCTT 51749 >seq1023 Length=175318 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||||||||||||||| ||| | || Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 138069 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||| ||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 138068 CAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 138009 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| || |||| ||| | ||| || || ||||| || || ||||| Sbjct 138008 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 137949 Query 133652 A 133652 | Sbjct 137948 A 137948 >seq190 Length=431 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||||||| | ||| ||| | ||||| |||||||| || Sbjct 260 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCA-TCCTCAAGCTGCTTTCC 202 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || |||||||| || || ||||| ||||| || ||||| ||| Sbjct 201 GGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTT 142 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || |||| | ||| || || | |||| || |||||||| || || Sbjct 141 CACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGT 82 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 81 CTTGACGAAAATCTGCAT 64 >seq189 Length=53202 Score = 93.3 bits (102), Expect = 4e-14 Identities = 124/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || || || || || | | ||| |||||| |||||||| | Sbjct 52949 GTGGACTCYTTCTGGATGTTATAGTCRGACA--GKGTRCGACCGTCCTCSAGCTGCTTKC 52892 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||| || || ||||| |||||||| ||||||| || Sbjct 52891 CGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACT 52832 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | | || | || ||| ||| ||| || || | ||||| ||| ||||| || Sbjct 52831 TSACRTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 52777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| |||||||| || || | || | ||||||||||| || || ||||| ||||| Sbjct 53194 GTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTT 53135 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||||| ||| | | || | || ||| | | ||| || || | ||| | Sbjct 53134 GTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTRAT 53075 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGA 133650 ||| || |||||||| || || |||| Sbjct 53074 GGTCTTTCCGGTCAGGGTCTTGACGA 53049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483413742056320