Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq189 89.7 3e-13 >seq189 Length=53202 Score = 89.7 bits (98), Expect = 3e-13 Identities = 129/186 (69%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| || |||||| ||| || || ||||| || || || || || || |||| || Sbjct 52961 ACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCS 52902 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || |||||||| |||||||||||||| || | || | || || ||||| Sbjct 52901 AGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGG 52842 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || | || | ||| | ||| ||||| || || || |||| ||||| || || Sbjct 52841 ATCTT-TGACTTSACRTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 52783 Query 33720 ACCTGT 33725 || || Sbjct 52782 GCCAGT 52777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328699320898560