Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq927 170 3e-36
seq721 96.9 5e-14
>seq927
Length=85386
Score = 170 bits (188), Expect = 3e-36
Identities = 223/303 (74%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| || || ||||||||||||||| |||| |
Sbjct 51344 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATC 51402
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGCT-GAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| |||| || |||||| ||||| | |||
Sbjct 51403 TTTCCAAGGATCTTCACG----ACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTC 51458
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
|| |||||||||||||| || ||||||| ||| || || || ||||||||| |
Sbjct 51459 GTCTCCCACGTCCTCGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 51517
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| ||||| | |||||| || | || ||||| |||| || ||||| ||||||||
Sbjct 51518 TGAGCGCTTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 51577
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||||||||||||||| || || ||||| |||||| |||||||
Sbjct 51578 CATGATGGAGAACATCCACTCTGAAACCTACTCTCTGCTCATCGATACCTACATCAAGGA 51637
Query 1456068 CCC 1456070
||
Sbjct 51638 GCC 51640
Score = 123 bits (136), Expect = 4e-22
Identities = 188/260 (72%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581
||||| |||||||| |||| |||||| | ||||| ||| || | || || | |||
Sbjct 52010 ATCATTGTCGAGGCTGTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGC 52069
Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641
|| | ||||||||||||| ||| |||||| |||||||||| || ||||| ||||||
Sbjct 52070 -CTGCTTGGCATGAACGCCAA-GCTGATGTGCGAGTACATTGAGTTC-GTCGCTGACCGC 52126
Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701
||||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||
Sbjct 52127 CTGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCAT 52185
Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGC 1456760
||||| ||||| | | |||||||||||||| ||||| || || || || |||
Sbjct 52186 GGAGTCCATCTCCTTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTACCA 52245
Query 1456761 CAAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 52246 GAAGGCTGGTGTCATGGCCA 52265
>seq721
Length=8534
Score = 96.9 bits (106), Expect = 5e-14
Identities = 287/442 (65%), Gaps = 16/442 (4%)
Strand=Plus/Plus
Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855
||||||| || ||||||||| ||||||||| |||||||||||||| || || | |
Sbjct 5225 CAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 5284
Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915
|| || || ||||| ||||| || ||||| || |||| || || || ||
Sbjct 5285 CCTCGATCTGCGCAAGAATCACGGTAA-GGAGGAGG-----TTCGCGCTCGTGACCTTTT 5338
Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975
|||| |||||||| ||| || || ||| ||| | | | || | | |||||| |
Sbjct 5339 CTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGAC 5398
Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035
|||||| ||||| ||||| || ||||| || ||| || | | || || ||
Sbjct 5399 GCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCGAGGC 5458
Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092
||||| | | ||| |||| || | || | |
Sbjct 5459 TCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 5515
Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152
| |||||| |||||| ||| |||||| | ||||| || | |||| |||| |||||||
Sbjct 5516 GCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 5575
Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210
||| || |||| || || |||||| |||||||||| || | || ||| | |||
Sbjct 5576 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 5633
Query 262211 CTGTGCACCGAGATCGTCCAGT 262232
|||||||| ||||| || |||
Sbjct 5634 CTGTGCACTGAGATTATCGAGT 5655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177698544253216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |