Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq189 104 2e-17
seq1023 96.9 3e-15
>seq189
Length=53202
Score = 104 bits (114), Expect = 2e-17
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||| || || | || || || |||| || |||||||| || |||||
Sbjct 52944 CTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAA 52885
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | |||| || |||||||||| ||||||| ||| | |
Sbjct 52884 GATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTT 52825
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | || ||||| || || ||||| | ||||| || || || ||
Sbjct 52824 GTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 52777
Score = 91.5 bits (100), Expect = 1e-13
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639
|||| ||||||||||| || ||||| ||||| ||||||||||| | |||| || |||||
Sbjct 53195 CGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCT 53136
Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699
||||| ||||||| ||| | | | | || ||||| || || ||||| | || |
Sbjct 53135 TGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTRA 53076
Query 35700 TCGTTTTACCCGTCA 35714
| || || || ||||
Sbjct 53075 TGGTCTTTCCGGTCA 53061
>seq1023
Length=175318
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || |||||||| || || || |
Sbjct 138129 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138070
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||| ||||| | |||| || |||||||||| |||||| ||| | ||||
Sbjct 138069 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 138011
Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||||| || || || | || || || |||||||||| || || ||
Sbjct 138010 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 137951
Query 35726 AA 35727
||
Sbjct 137950 AA 137949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450787018413440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |