Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq189 104 2e-17 seq1023 96.9 3e-15 >seq189 Length=53202 Score = 104 bits (114), Expect = 2e-17 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||| || || | || || || |||| || |||||||| || ||||| Sbjct 52944 CTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAA 52885 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| || |||||||||| ||||||| ||| | | Sbjct 52884 GATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTT 52825 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | || ||||| || || ||||| | ||||| || || || || Sbjct 52824 GTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 52777 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639 |||| ||||||||||| || ||||| ||||| ||||||||||| | |||| || ||||| Sbjct 53195 CGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCT 53136 Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 ||||| ||||||| ||| | | | | || ||||| || || ||||| | || | Sbjct 53135 TGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTRA 53076 Query 35700 TCGTTTTACCCGTCA 35714 | || || || |||| Sbjct 53075 TGGTCTTTCCGGTCA 53061 >seq1023 Length=175318 Score = 96.9 bits (106), Expect = 3e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || |||||||| || || || | Sbjct 138129 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138070 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||| ||||| | |||| || |||||||||| |||||| ||| | |||| Sbjct 138069 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 138011 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||||||||| || || || | || || || |||||||||| || || || Sbjct 138010 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 137951 Query 35726 AA 35727 || Sbjct 137950 AA 137949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787018413440