Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq721 183 4e-41 seq927 93.3 6e-14 >seq721 Length=8534 Score = 183 bits (202), Expect = 4e-41 Identities = 738/1151 (64%), Gaps = 16/1151 (1%) Strand=Plus/Minus Query 69268 AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATC 69327 || || | ||| || || || ||||| || ||||||| || | || | || ||| Sbjct 5704 AGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATC 5645 Query 69328 TCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTA 69387 || || || || ||| | ||||| ||||| || | ||| |||||||| ||||| Sbjct 5644 TCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTG 5585 Query 69388 CAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGAT 69447 || || |||||||| || || || || ||||||| ||| |||| | |||| ||| | Sbjct 5584 CAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCG 5525 Query 69448 TTCCAAACGACCCTAGCATTTATTACGGTCTTGTA---ACGCTTCTCTTTTTCATATT-- 69502 | ||| | | ||| || || ||||||| ||| ||| | || || | Sbjct 5524 TACCAGAGCTTCTGAGCCTTGAT---GGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTG 5468 Query 69503 GTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTG 69562 | ||| | |||| ||||| ||||| || | |||||| | | ||||| ||||| | Sbjct 5467 GCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGG 5410 Query 69563 GACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCC 69622 | || | | | ||| || | | ||| || || ||||| || |||||||| ||| Sbjct 5409 GGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCC 5350 Query 69623 AAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGA 69681 | ||||| || ||| || || | | | | || || || || ||| || ||| Sbjct 5349 ACAGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGA 5291 Query 69682 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGT 69741 ||||| ||||| | | ||| | ||||| || || || || || || | | | || || Sbjct 5290 TCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGG 5231 Query 69742 CGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGA 69801 || || || || ||||| || | || | || ||||| ||| | || | |||||| ||| Sbjct 5230 CGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGA 5171 Query 69802 ATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTA 69861 | |||||| || || || || ||||||| ||| ||| || | |||||||| Sbjct 5170 ACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGG 5111 Query 69862 CTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTG 69921 | | ||||| || || || || | || ||||| | ||||| || | || Sbjct 5110 TGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 5051 Query 69922 TCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGA 69981 ||||| |||||||| ||||| || | ||| || || || || || | | || Sbjct 5050 TCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGG 4991 Query 69982 TGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAA 70041 | || ||| | ||||| || | || || || ||||||||||| | |||| || Sbjct 4990 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGAC 4931 Query 70042 AGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGAC 70100 | || | |||||| ||||| || || || ||| | | | |||||||| | || || Sbjct 4930 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCG-TGAATTCCGACAGCAAC 4872 Query 70101 ACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGA 70160 |||||||| || |||||||| || || | || || || | |||||||| Sbjct 4871 ACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGA 4812 Query 70161 TTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAAC 70220 || || || ||||| || || |||||||| ||||| | ||||| | |||| | Sbjct 4811 CCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGC 4752 Query 70221 AGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGT-AGGTGAGATAATCG 70279 || || || | || || || |||| || | | || | | |||||| || | Sbjct 4751 CGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAG 4693 Query 70280 GAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAA 70339 ||| | ||| ||||| || || ||||| | | | | ||| || || | Sbjct 4692 GAGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGA 4633 Query 70340 ATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCAT 70399 || | |||||||||| |||||| | || || | ||| || | || || ||||| || | Sbjct 4632 ATTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGT 4573 Query 70400 AGTCAGGATGT 70410 |||| || ||| Sbjct 4572 AGTCGGGGTGT 4562 >seq927 Length=85386 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || || |||||| || || |||||||| | || || ||||| || || ||||| Sbjct 51957 CAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGA 51898 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 ||||||||||| |||||||| || ||||| || |||| || || || || || |||||| Sbjct 51897 CCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 51838 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 51837 ATACCCTCCACAGCGGCGAAGGCAACCAG 51809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686898771131520