Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq721 233 2e-56
seq927 109 7e-19
seq45 105 8e-18
>seq721
Length=8534
Score = 233 bits (258), Expect = 2e-56
Identities = 581/875 (66%), Gaps = 19/875 (2%)
Strand=Plus/Minus
Query 111220 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 111279
|||||| | || ||||||| || |||| |||||||||||| |||||| |
Sbjct 5717 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 5658
Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339
|||||| | ||| || || || | ||| || || ||| || |||| ||||| |||||
Sbjct 5657 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5598
Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 111399
||||||||||||||| |||||||||||||||||| |||| | || ||||| ||||| |
Sbjct 5597 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5538
Query 111400 TTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 111455
| |||||| || | ||| | | || | | || | |||| || |||| || ||||
Sbjct 5537 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 5482
Query 111456 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 111515
|| ||||||||| | |||||| || || ||||| ||||| | || | || || |
Sbjct 5481 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5422
Query 111516 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAA 111575
| |||| | || ||||| || | ||| | ||| |||| || ||||||||||| |
Sbjct 5421 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 5362
Query 111576 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 111635
| || || ||||||| | | || || || | | ||| |||| || | ||| || |
Sbjct 5361 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 5302
Query 111636 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 111695
| || | || |||||||| | || ||| |||||||| ||||| || |||| || |
Sbjct 5301 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 5242
Query 111696 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 111749
| || ||| | ||| | || | ||||| || || ||| |||||| |
Sbjct 5241 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 5185
Query 111750 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 111809
| || ||||| |||| |||||| | || || || || || ||| |||
Sbjct 5184 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 5125
Query 111810 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 111869
| || | | |||| | | || ||||| ||||| ||| ||||| ||||
Sbjct 5124 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 5065
Query 111870 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 111929
| | | ||||| |||| ||||| | || ||| | | | | | |||||||
Sbjct 5064 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 5005
Query 111930 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 111989
|| | | ||| ||| || ||| | |||||||| || || || | |||||| |||
Sbjct 5004 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4945
Query 111990 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 112048
| ||| |||||||||| || ||||||||| | | | |||||||| || |||||
Sbjct 4944 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4886
Query 112049 ATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|| |||| || || ||||| | || || ||| ||
Sbjct 4885 ATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 4851
>seq927
Length=85386
Score = 109 bits (120), Expect = 7e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||||||||||||||| ||||| || | || || ||||| |||||
Sbjct 51954 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 51895
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||| || || |||||||||| ||| | || | | |||||| |||||||||||||||
Sbjct 51894 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 51835
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
||||||||| || || |||| || || |||||||
Sbjct 51834 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 51795
>seq45
Length=26065
Score = 105 bits (116), Expect = 8e-18
Identities = 188/270 (70%), Gaps = 6/270 (2%)
Strand=Plus/Plus
Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 11679
||| || | ||||||||| ||||||||||||| || || || ||| | |||||| |
Sbjct 20509 CTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGGT 20568
Query 11680 TTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGC 11739
| | ||||||||||| || | || || ||||| |||||||| || ||||| | |
Sbjct 20569 TGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGGA 20628
Query 11740 GGCAGAG-CACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGG 11798
|| | ||||| | ||| || || |||||||| || |||| || || | |
Sbjct 20629 ACCACTGACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAATG 20687
Query 11799 TCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACT 11856
|||| || ||||| || ||| | ||||| ||| || || || ||||| ||||| |||
Sbjct 20688 TCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAACT 20747
Query 11857 TCCAAAATATCTCTCGGGTTGCTTGAGAAA 11886
|| | | | ||||||||||| ||| ||
Sbjct 20748 TCTCGA--ACCGCTCGGGTTGCTGGAGGAA 20775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628022830732800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |