Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq721 215 6e-51 seq927 132 6e-26 seq45 86.0 8e-12 >seq721 Length=8534 Score = 215 bits (238), Expect = 6e-51 Identities = 387/562 (69%), Gaps = 5/562 (1%) Strand=Plus/Minus Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 |||||| | || ||||||| || ||||| || || |||| |||||| | | Sbjct 5717 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 5658 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 |||||| ||||| || ||||||| ||| || || ||| || |||| |||||| || || Sbjct 5657 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5598 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| |||| || ||||||||||| |||||| | || | || ||||| || |||| Sbjct 5597 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5538 Query 118874 CTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932 || |||||| || | ||||| | || | || | | || | | | || ||||| | Sbjct 5537 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCT 5479 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 ||||||||| | |||||| || || ||||| ||||| | | || | || || || | Sbjct 5478 GCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGG 5419 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 ||| || ||||||||||| | ||| | ||| |||| || |||||||||||||| | Sbjct 5418 CCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGAT 5359 Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112 | ||| |||| || || |||| || || ||| |||| | || || | || ||||| Sbjct 5358 CGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCT 5299 Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 5298 TGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGG 5239 Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 || || |||| |||||| ||||| | || ||| |||||| ||||| | Sbjct 5238 CACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCA 5179 Query 119230 GCATTGGAATGATACCATCGGA 119251 |||| |||| ||||| | ||| Sbjct 5178 GCATAGGAACAATACCGTTGGA 5157 >seq927 Length=85386 Score = 132 bits (146), Expect = 6e-26 Identities = 305/457 (67%), Gaps = 18/457 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||| ||||||||||| ||||| ||| ||||| ||| |||||| Sbjct 52242 TAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATG 52183 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 52182 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 52129 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| ||||||||||||| ||||| || || |||||| || | ||| Sbjct 52128 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGG 52069 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| || |||| ||| ||| || | ||||| || | ||| Sbjct 52068 CCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATA 52009 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018 | | || || | | | || | | | || | | | ||| || ||| Sbjct 52008 TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGCA 51952 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||| ||||||||||| | || || ||||| ||||| ||| Sbjct 51951 AAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGC 51892 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||||| |||||| || | |||||||| ||||||||||| ||| Sbjct 51891 ATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCC 51832 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||||| ||||| |||| |||||| ||| |||| Sbjct 51831 TCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 51795 >seq45 Length=26065 Score = 86.0 bits (94), Expect = 8e-12 Identities = 326/504 (65%), Gaps = 27/504 (5%) Strand=Plus/Plus Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122 || ||||| || || || || | ||| || | |||||| | ||| || || || | Sbjct 20336 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 20395 Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180 || | |||||| | ||| | | ||| || |||||||||||||| | | || | Sbjct 20396 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 20453 Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACC--CGCACTGCGTTGCT---- 14234 ||| || ||| |||||||| || || ||||| || | | ||||| Sbjct 20454 TGAGAGTGCTTTCACGTTCATCGTTTCCA------CCACCAACGTTCGACTTTGCTCGAG 20507 Query 14235 ---TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAA 14291 | || | || ||||||||||| ||||| | ||| || || ||| | ||||| Sbjct 20508 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 20567 Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 | | |||| ||| || || | || |||||||| |||||||| || ||||| | || Sbjct 20568 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 20627 Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409 | | | ||| || | ||| || ||| |||||||| || |||| || || | Sbjct 20628 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 20685 Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 14467 ||||| || || || || |||| ||||| ||||||||| || ||| | ||||| | Sbjct 20686 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 20745 Query 14468 CTGCCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTC 14527 || | | | || || ||||| | |||||| |||| ||| | ||| |||| Sbjct 20746 CTTC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 20803 Query 14528 GCGGCGTCGATGCCTTCAACGTCA 14551 || |||| || || |||||||| Sbjct 20804 GCTTCGTCCATACCAGCAACGTCA 20827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618426170846080