Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq721 248 1e-60 seq478 127 2e-24 >seq721 Length=8534 Score = 248 bits (274), Expect = 1e-60 Identities = 481/702 (69%), Gaps = 10/702 (1%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| |||||||||||| || |||||| | || || |||||||| Sbjct 4913 TGAGACATACCACTTGATGTCCCAAAAGTACTTCACTCACGCCTCCCCCACTCTGTTCAA 4972 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || | ||| || || ||| | | ||||||||||| | ||| | ||| Sbjct 4973 TGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAG 5032 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 || || || || || || || |||||| |||||| ||||||||| | ||||| Sbjct 5033 CATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGG 5092 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||||||| || | || || | || | || || | ||| | || || || ||| Sbjct 5093 TATCGGTCTCAA-TG-TCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAAC 5150 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||| | || | || || || |||||||| || || || |||||||| || || || || Sbjct 5151 GGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGTG 5210 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 ||||||||||| |||||| || | || ||||||||||| ||||||||||||||| Sbjct 5211 GACCAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCC 5270 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || | | ||||| ||||| ||||| |||||| ||| | || ||| | ||| ||| Sbjct 5271 GATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCTCGT 5330 Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718 ||||| || ||| |||||||||| || || ||||||||| | || ||| ||| Sbjct 5331 GACCTTTTCTAC-GCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGG 5389 Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778 || ||| || | ||||| || ||| ||| ||||| | |||||||||||| || Sbjct 5390 TGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGA 5449 Query 53779 GTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836 ||| | | | || | |||| |||| ||||||| | |||| ||||| Sbjct 5450 GTTCGAGGCTCTCTACGCCAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACCATCAAG 5507 Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896 || | || | ||| | || || ||| || |||| ||||| || | || | |||| Sbjct 5508 GCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATG 5567 Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||||||| | |||| ||||||| |||||||||||| Sbjct 5568 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 5609 >seq478 Length=34606 Score = 127 bits (140), Expect = 2e-24 Identities = 301/450 (67%), Gaps = 20/450 (4%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||| ||||| || || || || |||| ||||||||| ||||| || || ||| | Sbjct 3910 CCAGTTCCAATACCATCCGCGCCGTTGATCAAAATCATCGGGACGACGGGCACAAAGACC 3851 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGG- 117270 || ||||| | || | || || || | ||| | || | || || |||| Sbjct 3850 TCGGGCTCGATCTTCTTGCCATCATCTTCGTTGTAAGTTAGTA----ATGGTTCATCGGC 3795 Query 117271 ---ATCGAATATGTTCTTG-GTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCT 117324 || ||| | |||| || || || | |||||||||| | |||||||||| || Sbjct 3794 CATATGGAAGAC---CTTGCGTGCAAAGGGAGATAGGCGAGTGTAGATGTAACGAGCACT 3738 Query 117325 TGCAGCATCCTTGCCACCAGC---AAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAG 117381 ||| ||| ||||||| | ||| || |||| || | |||||| ||||||| | Sbjct 3737 GGCACAATC---GCCACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCCAGGCA 3681 Query 117382 GTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCT 117441 ||| | ||||||| ||| |||||| | ||||| | | || || || || ||| Sbjct 3680 GTTGATATTGTTGGAGCCAACAAAGGTCTGAGCAAGGCCAACGATAGTCTGCTGAAGGGA 3621 Query 117442 CGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTT 117501 | ||||| ||||| || || ||| | | || | ||| ||||||| | | ||||| Sbjct 3620 GACGTCACCGTGGTGGTAGGCTGTCATTCCGGATACATGGCCTGCCAGCTCAACTACCTT 3561 Query 117502 CATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTT 117561 |||||| | ||| ||| || |||| | || |||||||||||||| ||||| Sbjct 3560 CATGTCCTTCTTCAAGTTGCGACGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTT 3501 Query 117562 CAGACCATCCGCCACGTGAGGGATCGAACG 117591 || ||||| | ||| ||| ||||| || Sbjct 3500 CAATCCATCGACAACGGAAGGAATCGAGCG 3471 Score = 89.7 bits (98), Expect = 6e-13 Identities = 197/292 (67%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || ||| ||||||| || | ||||| ||| |||||| || || | ||||| Sbjct 3760 CGAGTGTAGATGTAACGAGCACTGGCACAATCGCCACCACCTTGAAGTCGACTACCAAAG 3701 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||||| ||| ||||| ||||||| ||| || || ||||||| | Sbjct 3700 TTTCCACTAGGCTCCAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGAGCAAGGCCA 3641 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 || || || ||| || | ||||||||||| || || ||| |||| ||| || Sbjct 3640 ACGATAGTCTGCTGAAGGGAGACGTCACCGTGGTGGTAGGCTGTCAT-TCCG-GATACAT 3583 Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263 || |||| || | |||||||||||| || ||| ||| || ||||| || || Sbjct 3582 GGCCTGCCAGCTCAACTACCTTCATGTCCTTCTTCAAGTTGCGACGGAAACAGGTGTGAA 3523 Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315 |||||||||||| || ||||| || || || ||| ||||||||| || Sbjct 3522 GCACCTTGCGCTGACCGGGCTTCAATCCATCGACAACGGAAGGAATCGAGCG 3471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547208010646400