Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq721 248 1e-60
seq478 127 2e-24
>seq721
Length=8534
Score = 248 bits (274), Expect = 1e-60
Identities = 481/702 (69%), Gaps = 10/702 (1%)
Strand=Plus/Plus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
|||||| ||| |||| ||| |||||||||||| || |||||| | || || ||||||||
Sbjct 4913 TGAGACATACCACTTGATGTCCCAAAAGTACTTCACTCACGCCTCCCCCACTCTGTTCAA 4972
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
|| | ||| || || ||| | | ||||||||||| | ||| | |||
Sbjct 4973 TGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAG 5032
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
|| || || || || || || |||||| |||||| ||||||||| | |||||
Sbjct 5033 CATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGG 5092
Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479
||||||| || | || || | || | || || | ||| | || || || |||
Sbjct 5093 TATCGGTCTCAA-TG-TCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAAC 5150
Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539
||| | || | || || || |||||||| || || || |||||||| || || || ||
Sbjct 5151 GGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGTG 5210
Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599
||||||||||| |||||| || | || ||||||||||| |||||||||||||||
Sbjct 5211 GACCAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCC 5270
Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659
|| | | ||||| ||||| ||||| |||||| ||| | || ||| | ||| |||
Sbjct 5271 GATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCTCGT 5330
Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718
||||| || ||| |||||||||| || || ||||||||| | || ||| |||
Sbjct 5331 GACCTTTTCTAC-GCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGG 5389
Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778
|| ||| || | ||||| || ||| ||| ||||| | |||||||||||| ||
Sbjct 5390 TGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGA 5449
Query 53779 GTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836
||| | | | || | |||| |||| ||||||| | |||| |||||
Sbjct 5450 GTTCGAGGCTCTCTACGCCAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACCATCAAG 5507
Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896
|| | || | ||| | || || ||| || |||| ||||| || | || | ||||
Sbjct 5508 GCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATG 5567
Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||||||| | |||| ||||||| ||||||||||||
Sbjct 5568 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 5609
>seq478
Length=34606
Score = 127 bits (140), Expect = 2e-24
Identities = 301/450 (67%), Gaps = 20/450 (4%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|||||||| ||||| || || || || |||| ||||||||| ||||| || || ||| |
Sbjct 3910 CCAGTTCCAATACCATCCGCGCCGTTGATCAAAATCATCGGGACGACGGGCACAAAGACC 3851
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGG- 117270
|| ||||| | || | || || || | ||| | || | || || ||||
Sbjct 3850 TCGGGCTCGATCTTCTTGCCATCATCTTCGTTGTAAGTTAGTA----ATGGTTCATCGGC 3795
Query 117271 ---ATCGAATATGTTCTTG-GTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCT 117324
|| ||| | |||| || || || | |||||||||| | |||||||||| ||
Sbjct 3794 CATATGGAAGAC---CTTGCGTGCAAAGGGAGATAGGCGAGTGTAGATGTAACGAGCACT 3738
Query 117325 TGCAGCATCCTTGCCACCAGC---AAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAG 117381
||| ||| ||||||| | ||| || |||| || | |||||| ||||||| |
Sbjct 3737 GGCACAATC---GCCACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCCAGGCA 3681
Query 117382 GTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCT 117441
||| | ||||||| ||| |||||| | ||||| | | || || || || |||
Sbjct 3680 GTTGATATTGTTGGAGCCAACAAAGGTCTGAGCAAGGCCAACGATAGTCTGCTGAAGGGA 3621
Query 117442 CGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTT 117501
| ||||| ||||| || || ||| | | || | ||| ||||||| | | |||||
Sbjct 3620 GACGTCACCGTGGTGGTAGGCTGTCATTCCGGATACATGGCCTGCCAGCTCAACTACCTT 3561
Query 117502 CATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTT 117561
|||||| | ||| ||| || |||| | || |||||||||||||| |||||
Sbjct 3560 CATGTCCTTCTTCAAGTTGCGACGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTT 3501
Query 117562 CAGACCATCCGCCACGTGAGGGATCGAACG 117591
|| ||||| | ||| ||| ||||| ||
Sbjct 3500 CAATCCATCGACAACGGAAGGAATCGAGCG 3471
Score = 89.7 bits (98), Expect = 6e-13
Identities = 197/292 (67%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| ||| ||||||| || | ||||| ||| |||||| || || | |||||
Sbjct 3760 CGAGTGTAGATGTAACGAGCACTGGCACAATCGCCACCACCTTGAAGTCGACTACCAAAG 3701
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| ||||| ||| ||||| ||||||| ||| || || ||||||| |
Sbjct 3700 TTTCCACTAGGCTCCAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGAGCAAGGCCA 3641
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
|| || || ||| || | ||||||||||| || || ||| |||| ||| ||
Sbjct 3640 ACGATAGTCTGCTGAAGGGAGACGTCACCGTGGTGGTAGGCTGTCAT-TCCG-GATACAT 3583
Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263
|| |||| || | |||||||||||| || ||| ||| || ||||| || ||
Sbjct 3582 GGCCTGCCAGCTCAACTACCTTCATGTCCTTCTTCAAGTTGCGACGGAAACAGGTGTGAA 3523
Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315
|||||||||||| || ||||| || || || ||| ||||||||| ||
Sbjct 3522 GCACCTTGCGCTGACCGGGCTTCAATCCATCGACAACGGAAGGAATCGAGCG 3471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547208010646400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |