Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq721 273 2e-68 seq190 176 5e-39 seq189 158 1e-33 seq1023 123 3e-23 seq923 89.7 6e-13 >seq721 Length=8534 Score = 273 bits (302), Expect = 2e-68 Identities = 806/1228 (66%), Gaps = 27/1228 (2%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| ||||| |||||||| ||| | ||||| || | | | ||||| || | Sbjct 6069 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGG 6010 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 | ||| | ||||||| | ||| || | | | ||| |||| || ||| ||| | Sbjct 6009 GACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGA 5950 Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 ||| |||| | | |||| || |||||||| || | || || || Sbjct 5949 AGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGCAGAGCCAGGA 5890 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778 | | ||||| || || | || |||| ||||| |||||||| || ||| | || | Sbjct 5889 AAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTT-GCTCTTC 5831 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 | ||||| |||| ||||| |||| |||| |||| |||||| ||| | | | Sbjct 5830 TTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGA 5771 Query 80839 ACCCGTGTAACATCATGAAGTTT-CTGAAAGTCGAATTGGTTCCCCT----TC-ACAAAT 80892 ||| | || || || || || | |||| | | | || | || ||| | Sbjct 5770 ACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGAGTCGACATAG 5711 Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT--CTGTAAACT 80950 | || ||| || || ||||| ||||| || |||||||| |||| ||||| || Sbjct 5710 GTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTA--CT 5653 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 ||| || || ||||||| ||||| ||| ||||||||||| |||||||| || Sbjct 5652 CGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCT 5593 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 | ||||||||| ||||||||| |||| | ||| |||| ||||| ||| | || || Sbjct 5592 TCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGA 5533 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | ||||||| ||| | || | ||||||| ||||||| ||| || | | | Sbjct 5532 GAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCGT 5473 Query 81131 ACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGT 81190 |||||||||| | ||||||| |||||| | |||| ||| | ||| ||| | Sbjct 5472 ACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCAT 5413 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 | ||||| | || |||||| || | ||| || ||||||||| || ||| Sbjct 5412 TGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGG 5353 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCG 81308 |||| || ||| ||| ||||| || |||||| ||||||| | ||| || || ||| Sbjct 5352 TCCACAGAGCGTAGAAAAGGTCACG--AGCGCGAACCTCCTCCTTACCGTGATTCTTGCG 5295 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 || ||||| || || | || || || ||||| |||||||| || | ||| | | || Sbjct 5294 CAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC 5235 Query 81369 CTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACAT 81425 ||| | |||||||||| || ||||| || || |||||| ||||||| ||| Sbjct 5234 GGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCAT 5175 Query 81426 AGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA- 81484 ||| | ||||| | || ||||| || || | || || || | ||||| | Sbjct 5174 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAAT 5115 Query 81485 -CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543 | || |||| |||||||| ||||| | ||| || ||| ||||| || Sbjct 5114 GCGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTG 5057 Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603 | || |||||||| ||||| ||||| ||| ||| ||||| || ||| || || Sbjct 5056 AGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCG 4997 Query 81604 ATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 | || ||| || ||| ||||||||||||| || |||| |||||| |||| || Sbjct 4996 AGCT--GGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACT 4939 Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | ||||||| || || || || || | ||| || || |||||||| |||| Sbjct 4938 TTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGA 4879 Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749 ||| |||||||| | || || ||| || Sbjct 4878 CAGCAACACGCATCAGCAAGTGCTGAGG 4851 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| ||||| | ||| ||||||||||| | |||||| Sbjct 6577 GTACGCAGGTAGTACATGCCGGTCTTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTG 6518 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 | ||||| | | ||||| | || || | |||||| || ||||| |||||| |||| Sbjct 6517 GTCAGCTTGCCCATGGTGGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG 6458 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || || ||||| || ||||| Sbjct 6457 AAGGCACCGCGATCGGCGGCCAT 6435 >seq190 Length=431 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||| | || ||||| || |||||||| ||||| || |||||| Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||| || ||||| || ||||||| ||| || || | || || || Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 243 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || ||| | ||||| || ||||| Sbjct 244 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGTCTMCGTGGTGG 290 Score = 105 bits (116), Expect = 8e-18 Identities = 106/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| |||||||| || || ||||| ||| || | Sbjct 292 ATGCARATYTTYGTCAAGACWYTSACCGGMAAGACTATCACACTAGAGGTGGAG--AGCT 349 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || | ||| || ||||||||||||||||| ||||| || |||| Sbjct 350 CAGACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCYCCTGACC 409 Query 27524 AGCAGCGTCTAATTTTTGCTGG 27545 |||| ||||| || || || || Sbjct 410 AGCARCGTCTYATCTTYGCYGG 431 >seq189 Length=53202 Score = 158 bits (174), Expect = 1e-33 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||||||||| | |||| ||| | || | ||| | Sbjct 52777 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYGTSAAGTCA 52836 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| ||||| || |||||||||||| | || ||||| || ||| Sbjct 52837 AAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGMAAG 52896 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | ||| || || | |||||||| |||| || || |||||||| || Sbjct 52897 CAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCACTCTMCAY 52956 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | || || || || || Sbjct 52957 YTGGTCCTYCGYCTCCGTGGCGG 52979 Score = 136 bits (150), Expect = 5e-27 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || |||||||||||||| | |||| ||| | Sbjct 53051 GTCAAGACCCTGACCGGAAAGACCATYACCCTTGAGGTTGAGTCYAGCGATACCATCGAC 53110 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || || |||||||||||||| ||||| || |||||||||||| | || Sbjct 53111 AAYGTSAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATC 53170 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569 ||||| || ||||| || ||||| | |||||| Sbjct 53171 TTTGCCGGMAAGCAGCTGGAGGACGGTCGTAC 53202 >seq1023 Length=175318 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 137949 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 138008 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| ||||| || ||||| |||||||| Sbjct 138009 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 138068 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 138069 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 138127 Query 27594 GG 27595 || Sbjct 138128 GG 138129 >seq923 Length=14999 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || ||||| || ||| | || || ||||||||||| |||||| Sbjct 11427 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 11486 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | || || || |||| ||||| || || ||||| || || | Sbjct 11487 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 11546 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 11547 CGCCTGCGTGGTGG 11560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570302073468160