Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq721 273 2e-68
seq190 176 5e-39
seq189 158 1e-33
seq1023 123 3e-23
seq923 89.7 6e-13
>seq721
Length=8534
Score = 273 bits (302), Expect = 2e-68
Identities = 806/1228 (66%), Gaps = 27/1228 (2%)
Strand=Plus/Minus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599
|||||||||||| ||||| |||||||| ||| | ||||| || | | | ||||| || |
Sbjct 6069 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGG 6010
Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659
| ||| | ||||||| | ||| || | | | ||| |||| || ||| ||| |
Sbjct 6009 GACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGA 5950
Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719
||| |||| | | |||| || |||||||| || | || || ||
Sbjct 5949 AGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGCAGAGCCAGGA 5890
Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778
| | ||||| || || | || |||| ||||| |||||||| || ||| | || |
Sbjct 5889 AAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTT-GCTCTTC 5831
Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838
| ||||| |||| ||||| |||| |||| |||| |||||| ||| | | |
Sbjct 5830 TTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGA 5771
Query 80839 ACCCGTGTAACATCATGAAGTTT-CTGAAAGTCGAATTGGTTCCCCT----TC-ACAAAT 80892
||| | || || || || || | |||| | | | || | || ||| |
Sbjct 5770 ACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGAGTCGACATAG 5711
Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT--CTGTAAACT 80950
| || ||| || || ||||| ||||| || |||||||| |||| ||||| ||
Sbjct 5710 GTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTA--CT 5653
Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010
||| || || ||||||| ||||| ||| ||||||||||| |||||||| ||
Sbjct 5652 CGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCT 5593
Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070
| ||||||||| ||||||||| |||| | ||| |||| ||||| ||| | || ||
Sbjct 5592 TCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGA 5533
Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130
| ||||||| ||| | || | ||||||| ||||||| ||| || | | |
Sbjct 5532 GAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCGT 5473
Query 81131 ACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGT 81190
|||||||||| | ||||||| |||||| | |||| ||| | ||| ||| |
Sbjct 5472 ACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCAT 5413
Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250
| ||||| | || |||||| || | ||| || ||||||||| || |||
Sbjct 5412 TGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGG 5353
Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCG 81308
|||| || ||| ||| ||||| || |||||| ||||||| | ||| || || |||
Sbjct 5352 TCCACAGAGCGTAGAAAAGGTCACG--AGCGCGAACCTCCTCCTTACCGTGATTCTTGCG 5295
Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368
|| ||||| || || | || || || ||||| |||||||| || | ||| | | ||
Sbjct 5294 CAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC 5235
Query 81369 CTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACAT 81425
||| | |||||||||| || ||||| || || |||||| ||||||| |||
Sbjct 5234 GGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCAT 5175
Query 81426 AGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA- 81484
||| | ||||| | || ||||| || || | || || || | ||||| |
Sbjct 5174 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAAT 5115
Query 81485 -CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543
| || |||| |||||||| ||||| | ||| || ||| ||||| ||
Sbjct 5114 GCGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTG 5057
Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603
| || |||||||| ||||| ||||| ||| ||| ||||| || ||| || ||
Sbjct 5056 AGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCG 4997
Query 81604 ATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661
| || ||| || ||| ||||||||||||| || |||| |||||| |||| ||
Sbjct 4996 AGCT--GGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACT 4939
Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721
| ||||||| || || || || || | ||| || || |||||||| ||||
Sbjct 4938 TTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGA 4879
Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749
||| |||||||| | || || ||| ||
Sbjct 4878 CAGCAACACGCATCAGCAAGTGCTGAGG 4851
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||||||||| ||||| | ||| ||||||||||| | ||||||
Sbjct 6577 GTACGCAGGTAGTACATGCCGGTCTTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTG 6518
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
| ||||| | | ||||| | || || | |||||| || ||||| |||||| ||||
Sbjct 6517 GTCAGCTTGCCCATGGTGGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG 6458
Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180
|| || || ||||| || |||||
Sbjct 6457 AAGGCACCGCGATCGGCGGCCAT 6435
>seq190
Length=431
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || |||||||||||||| || ||||| || ||||||
Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| ||||| | || ||||| || |||||||| ||||| || ||||||
Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || ||||| || ||||| || ||||||| ||| || || | || || ||
Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 243
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || || || ||| | ||||| || |||||
Sbjct 244 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGTCTMCGTGGTGG 290
Score = 105 bits (116), Expect = 8e-18
Identities = 106/142 (75%), Gaps = 4/142 (3%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | ||||| |||||||| || || ||||| ||| || |
Sbjct 292 ATGCARATYTTYGTCAAGACWYTSACCGGMAAGACTATCACACTAGAGGTGGAG--AGCT 349
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | || | ||| || ||||||||||||||||| ||||| || ||||
Sbjct 350 CAGACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCYCCTGACC 409
Query 27524 AGCAGCGTCTAATTTTTGCTGG 27545
|||| ||||| || || || ||
Sbjct 410 AGCARCGTCTYATCTTYGCYGG 431
>seq189
Length=53202
Score = 158 bits (174), Expect = 1e-33
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || |||||||||||||| | |||| ||| | || | ||| |
Sbjct 52777 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYGTSAAGTCA 52836
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| ||||| || |||||||||||| | || ||||| || |||
Sbjct 52837 AAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGMAAG 52896
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | ||| || || | |||||||| |||| || || |||||||| ||
Sbjct 52897 CAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCACTCTMCAY 52956
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
| ||| | || || || || ||
Sbjct 52957 YTGGTCCTYCGYCTCCGTGGCGG 52979
Score = 136 bits (150), Expect = 5e-27
Identities = 120/152 (79%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || ||||| ||||| || || |||||||||||||| | |||| ||| |
Sbjct 53051 GTCAAGACCCTGACCGGAAAGACCATYACCCTTGAGGTTGAGTCYAGCGATACCATCGAC 53110
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || || |||||||||||||| ||||| || |||||||||||| | ||
Sbjct 53111 AAYGTSAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATC 53170
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569
||||| || ||||| || ||||| | ||||||
Sbjct 53171 TTTGCCGGMAAGCAGCTGGAGGACGGTCGTAC 53202
>seq1023
Length=175318
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || || || ||||| | || | |||
Sbjct 137949 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 138008
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||| ||||||||
Sbjct 138009 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 138068
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||||| || ||||| ||| ||||| || |||| ||
Sbjct 138069 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 138127
Query 27594 GG 27595
||
Sbjct 138128 GG 138129
>seq923
Length=14999
Score = 89.7 bits (98), Expect = 6e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| ||||| || ||||| || ||| | || || ||||||||||| ||||||
Sbjct 11427 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 11486
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || || || | || || || |||| ||||| || || ||||| || || |
Sbjct 11487 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 11546
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 11547 CGCCTGCGTGGTGG 11560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570302073468160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |