Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq189 102 5e-17
seq923 84.2 1e-11
>seq189
Length=53202
Score = 102 bits (112), Expect = 5e-17
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | |||| || |||||| ||| || || |||||||| || ||
Sbjct 52979 CCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGAC 52920
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || |||||||| || |||||||| ||||| || ||
Sbjct 52919 AGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGA 52860
Query 34600 ACTCCCTCCTTGTCTGTGATCTTT 34623
| ||||||||||| |||||||
Sbjct 52859 ATGCCCTCCTTGTCCTGGATCTTT 52836
>seq923
Length=14999
Score = 84.2 bits (92), Expect = 1e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
|||||| || ||||| ||||| ||||| || || |||| || || || ||||| || ||
Sbjct 11525 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 11466
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615
|| ||||| |||||||| || || | |||||||||||||
Sbjct 11465 GATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTCTG 11425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314725119824144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |