Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq190 149 1e-30
seq189 143 6e-29
seq1023 131 4e-25
seq721 129 1e-24
seq923 107 4e-18
>seq190
Length=431
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||| || || |||||||| ||||| | ||| || | |||||
Sbjct 275 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 216
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| || ||||| |||||||| |||| || ||||| ||
Sbjct 215 TCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCT 156
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||| || ||||| || || || || || || || ||||| |||
Sbjct 155 TGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTC 96
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 95 TTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 64
Score = 122 bits (134), Expect = 2e-22
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034
|| || ||||| || || || |||||||| |||| || ||||||||||| |||||
Sbjct 431 CCRGCRAAGATRAGACGYTGCTGGTCAGGRGGAATACCCTCCTTGTCCTGAATCTTGCTC 372
Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
|| ||||| ||||||||||| ||||| || ||||| || ||||| ||||| || || |
Sbjct 371 TTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTKCCGGTSARW 312
Query 211095 GTCTTTACAAACACCTGCAT 211114
||||| || || | |||||
Sbjct 311 GTCTTGACRAARATYTGCAT 292
>seq189
Length=53202
Score = 143 bits (158), Expect = 6e-29
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | || ||||||||||| || ||||||||||| || | || || | || ||
Sbjct 52964 AGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCC 52905
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| | || || ||||| || |||| || |||||||||
Sbjct 52904 TCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCC 52845
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || || || |||||||| || | |||||||| || ||||| |||
Sbjct 52844 TGGATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 52785
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 52784 TTGCCAGTGA 52775
Score = 111 bits (122), Expect = 4e-19
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || ||||||||||| || || ||||| | || || |||||||| |||| || |||
Sbjct 53196 CCGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCC 53137
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||||||||||||| || || || |||||||| || |||||||| || ||
Sbjct 53136 TTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTR 53077
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTAC 211102
|| |||||||| || || ||||| ||
Sbjct 53076 ATGGTCTTTCCGGTCAGGGTCTTGAC 53051
>seq1023
Length=175318
Score = 131 bits (144), Expect = 4e-25
Identities = 139/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || ||||||||||| ||||||||
Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138068
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || ||||||||||| |||| || ||||||||||||||||| || ||||| |||
Sbjct 138067 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 138008
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 138007 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 137951
Query 211104 AA 211105
||
Sbjct 137950 AA 137949
>seq721
Length=8534
Score = 129 bits (142), Expect = 1e-24
Identities = 196/278 (71%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||| ||||| || ||| ||||| ||||| |||||||| | ||
Sbjct 5609 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 5553
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| || ||| |||||||| | ||| |||| ||| || || |||||
Sbjct 5552 AGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 5493
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || | ||||||||| |||||| ||||||| || || ||||||||
Sbjct 5492 GCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATC 5433
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || || || |||||||||||||||||||| |||| | ||||| ||| || ||
Sbjct 5432 AGCTAGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCG 5373
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
||||||||||| || | |||||| | || |||||||
Sbjct 5372 CTTCATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAA 5335
>seq923
Length=14999
Score = 107 bits (118), Expect = 4e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| || ||||| || |||||||| ||||||| ||| || | || ||
Sbjct 11545 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 11486
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| |||||||| || |||||||| | |||||||||||||| |||| || ||||||||
Sbjct 11485 TCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTC 11427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159134653290320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |