Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq190 178 3e-39 seq1023 152 1e-31 seq189 134 3e-26 seq923 123 5e-23 seq927 91.5 3e-13 >seq190 Length=431 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| ||| || ||||||||||| || | Sbjct 291 ACCACCACGKAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGA 232 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||| || || || ||||||||||| | |||||| |||||| || Sbjct 231 AAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGG 172 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||| ||||| | || || |||||||||| || || | ||||| Sbjct 171 AATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGAC 112 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 111 TTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 64 Score = 104 bits (114), Expect = 5e-17 Identities = 108/142 (76%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || ||||| | ||| || |||||| ||||||||||||||||| || ||| ||||| Sbjct 431 CCRGCRAAGATRAGACGYTGCTGGTCAGGRGGAATACCCTCCTTGTCCTGAATC-TTGCT 373 Query 283020 -TTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCA 283077 || ||| | ||||| ||||| | |||| || || || || ||||| ||||| || || | Sbjct 372 CTTGACGTTGTCGATGGTGTCTG-AGCTCTCCACCTCTAGTGTGATAGTCTTKCCGGTSA 314 Query 283078 AAGTCTTAACGAATATCTGCAT 283099 ||||| || || || ||||| Sbjct 313 RWGTCTTGACRAARATYTGCAT 292 >seq1023 Length=175318 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138068 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| ||||| ||||||||||| |||||||| | || ||| | ||| Sbjct 138067 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 138008 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 138007 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 137949 >seq189 Length=53202 Score = 134 bits (148), Expect = 3e-26 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| || | ||| || || |||||||| ||||| | Sbjct 52980 ACCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGA 52921 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| || || || ||||||||||||||||| || ||||| || Sbjct 52920 CAGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGG 52861 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||||| || || | ||||| || || | || || Sbjct 52860 AATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAAC 52801 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 52800 CTCAAGGGTGATGGTCTTGCCAGT 52777 Score = 107 bits (118), Expect = 4e-18 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 || || || ||||| || || || ||||||||||||||||| || |||||| ||||| Sbjct 53202 GTACGACCGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATG 53143 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||||| || || | ||||| || || | || || || Sbjct 53142 CCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCA 53083 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || || ||||| || |||| ||||| |||| Sbjct 53082 AGGGTRATGGTCTTTCCGGTCAGGGTCTTGACGA 53049 >seq923 Length=14999 Score = 123 bits (136), Expect = 5e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || ||||||||||| || | Sbjct 11561 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 11502 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || ||||||||||||||||||||| || Sbjct 11501 AAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGG 11442 Query 282992 AATACCCTCCTTGTCT 283007 |||||||||||||||| Sbjct 11441 AATACCCTCCTTGTCT 11426 >seq927 Length=85386 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| ||| | || | |||||||| || | || ||| Sbjct 52038 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 52097 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | | || || || ||||| ||||| || | | ||||| || || || |||| | Sbjct 52098 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 52157 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| | | |||||||||| || |||||| ||| || | || || || |||| Sbjct 52158 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACT 52217 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||||||||||||| | || || || | | | ||||| Sbjct 52218 TCTTCGAAAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 52257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046723535547872