Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq190 178 3e-39
seq1023 152 1e-31
seq189 134 3e-26
seq923 123 5e-23
seq927 91.5 3e-13
>seq190
Length=431
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || ||||||||||| || |
Sbjct 291 ACCACCACGKAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGA 232
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| || || || ||||||||||| | |||||| |||||| ||
Sbjct 231 AAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGG 172
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||| ||||| | || || |||||||||| || || | |||||
Sbjct 171 AATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGAC 112
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 111 TTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 64
Score = 104 bits (114), Expect = 5e-17
Identities = 108/142 (76%), Gaps = 4/142 (3%)
Strand=Plus/Minus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| || ||||| | ||| || |||||| ||||||||||||||||| || ||| |||||
Sbjct 431 CCRGCRAAGATRAGACGYTGCTGGTCAGGRGGAATACCCTCCTTGTCCTGAATC-TTGCT 373
Query 283020 -TTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCA 283077
|| ||| | ||||| ||||| | |||| || || || || ||||| ||||| || || |
Sbjct 372 CTTGACGTTGTCGATGGTGTCTG-AGCTCTCCACCTCTAGTGTGATAGTCTTKCCGGTSA 314
Query 283078 AAGTCTTAACGAATATCTGCAT 283099
||||| || || || |||||
Sbjct 313 RWGTCTTGACRAARATYTGCAT 292
>seq1023
Length=175318
Score = 152 bits (168), Expect = 1e-31
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138068
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| ||||||||| ||||| ||||||||||| |||||||| | || ||| | |||
Sbjct 138067 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 138008
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 138007 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 137949
>seq189
Length=53202
Score = 134 bits (148), Expect = 3e-26
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || |||| || | ||| || || |||||||| ||||| |
Sbjct 52980 ACCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGA 52921
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || ||||||||||||||||| || ||||| ||
Sbjct 52920 CAGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGG 52861
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||||| || || | ||||| || || | || ||
Sbjct 52860 AATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAAC 52801
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 52800 CTCAAGGGTGATGGTCTTGCCAGT 52777
Score = 107 bits (118), Expect = 4e-18
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995
|| || || ||||| || || || ||||||||||||||||| || |||||| |||||
Sbjct 53202 GTACGACCGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATG 53143
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||||| || || | ||||| || || | || || ||
Sbjct 53142 CCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCA 53083
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| || || ||||| || |||| ||||| ||||
Sbjct 53082 AGGGTRATGGTCTTTCCGGTCAGGGTCTTGACGA 53049
>seq923
Length=14999
Score = 123 bits (136), Expect = 5e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || ||||||||||| || |
Sbjct 11561 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 11502
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || || || ||||||||||||||||||||| ||
Sbjct 11501 AAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGG 11442
Query 282992 AATACCCTCCTTGTCT 283007
||||||||||||||||
Sbjct 11441 AATACCCTCCTTGTCT 11426
>seq927
Length=85386
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| ||| | || | |||||||| || | || |||
Sbjct 52038 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 52097
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| | || || || ||||| ||||| || | | ||||| || || || |||| |
Sbjct 52098 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 52157
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||| | | |||||||||| || |||||| ||| || | || || || ||||
Sbjct 52158 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACT 52217
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||||||||||||| | || || || | | | |||||
Sbjct 52218 TCTTCGAAAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 52257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046723535547872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |