Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq190 107 1e-18
seq189 100 2e-16
seq1023 93.3 3e-14
>seq190
Length=431
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| ||||| |||||||||||||||| ||| ||| | || ||
Sbjct 272 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCA 213
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | ||| ||||| || | || | || ||||| ||
Sbjct 212 AGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGA 153
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || || |||| || || || || | || || |||||
Sbjct 152 ATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTG 93
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||| || |||||
Sbjct 92 CCGGTGAGTGTCTTGACGAAAATCTGCAT 64
>seq189
Length=53202
Score = 100 bits (110), Expect = 2e-16
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| || || ||| ||| || |||||||| || || | || || |||| ||
Sbjct 52961 ACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCS 52902
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||||||||||||| || | || | || ||||| |||
Sbjct 52901 AGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGG 52842
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| ||| ||| || ||||| | || || |||||
Sbjct 52841 ATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 52782
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 52781 CCAGTGA 52775
Score = 100 bits (110), Expect = 2e-16
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240
|||| ||||||||||| ||||||||||||||||||||||| || | || | || ||||
Sbjct 53195 CGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCT 53136
Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300
| ||| ||||| ||| | | | ||||| ||| || || ||||| | || |
Sbjct 53135 TGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTRA 53076
Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| |||||||| || |||||||| ||||
Sbjct 53075 TGGTCTTTCCGGTCAGGGTCTTGACGA 53049
>seq1023
Length=175318
Score = 93.3 bits (102), Expect = 3e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| ||| || ||| | || || |||||||| ||||| ||||
Sbjct 138129 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138070
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
||| |||||| || || | || | || ||||| ||| ||||| ||| | |
Sbjct 138069 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 138010
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| ||||||||| || || || || | ||||| ||||| ||||| |||||||| ||||
Sbjct 138009 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 137950
Query 44328 A 44328
|
Sbjct 137949 A 137949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359985275536656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |