Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq190 138 3e-27
seq1023 111 4e-19
seq189 111 4e-19
seq721 84.2 5e-11
>seq190
Length=431
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || ||||| || || || || || ||
Sbjct 67 CAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCCGAT 126
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||||| || || || || || || || |||||||||
Sbjct 127 ACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAGCAA 186
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| |||||||| ||||| || ||||| | || ||| ||||||| ||| ||
Sbjct 187 CGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAACATC 246
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| ||||| || |||||
Sbjct 247 CAGAAGGAATCCACACTCCACCTTGT 272
Score = 129 bits (142), Expect = 1e-24
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || | || || || || ||||| || |||||||| |||||||||
Sbjct 295 CARATYTTYGTCAAGACWYTSACCGGMAAGACTATCACACTAGAGGTGGAGAGCTCAGAC 354
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 355 ACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCYCCTGACCAGCAR 414
Query 178044 CGACTTATCTTCGCCGG 178060
|| || ||||| || ||
Sbjct 415 CGTCTYATCTTYGCYGG 431
>seq1023
Length=175318
Score = 111 bits (122), Expect = 4e-19
Identities = 135/183 (74%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 137948 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 138004
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || || || || ||||| || ||
Sbjct 138005 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCG 138064
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| ||||||||||| || |||||||| ||||| | || || ||| || ||| ||||
Sbjct 138065 TCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 138124
Query 178106 AAA 178108
||
Sbjct 138125 GAA 138127
>seq189
Length=53202
Score = 111 bits (122), Expect = 4e-19
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || |||||||| ||||| || | || |||||||| || || ||
Sbjct 52775 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYGTSAAGT 52834
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||| |||||||| || || || || || |||||||| || | ||||| ||||| |
Sbjct 52835 CAAAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGMA 52894
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| || || || | || || | || |||||| |||| || || || || || |
Sbjct 52895 AGCAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCACTCTMC 52954
Query 178123 ATCTTGT 178129
| | ||
Sbjct 52955 AYYTGGT 52961
>seq721
Length=8534
Score = 84.2 bits (92), Expect = 5e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 214204 AGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGCTCTTCCCTCGTTTTCG 214263
|||||| | |||||| | || ||||| | | ||| | | | ||||| | |||
Sbjct 5533 AGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCG 5474
Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323
||||| | || |||| ||| || || ||||||||||||| | || || || |||||
Sbjct 5473 TACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCA 5414
Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383
||||||||||| || |||| | || || || ||| | |||||||| || ||||
Sbjct 5413 TTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGG 5354
Query 214384 GTCCAGATTGCATAAAAAA 214402
||||| | || || ||||
Sbjct 5353 GTCCACAGAGCGTAGAAAA 5335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203713186162592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |