Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 183 3e-41
seq10 132 5e-26
seq1 131 2e-25
>seq2
Length=2385438
Score = 183 bits (202), Expect = 3e-41
Identities = 214/286 (75%), Gaps = 5/286 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| ||||||||| ||||||||||| || |||||||| | |||||| | || |||
Sbjct 269852 ATCTGGCACATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATCTG 269911
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | ||| |||||||| | ||||| | || ||
Sbjct 269912 TCCAAGGATCTCCA-CGACTGGCACAACCGCATGAACGACGATGAGCGTTACTTTGTCTC 269970
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||||| || || || ||||||||| ||| || || ||||||||||| || | |||||
Sbjct 269971 CCACGTCCTTGCTTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCTTGAGCG 270030
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
|||| | ||||| ||||| ||||||| || ||||||||||| || |||||| ||
Sbjct 270031 TTTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGAT 270090
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||||||| | |||||||| | || || ||||| || || |||
Sbjct 270091 GGAGAACATCCACTCGGAGACCTACTCCCTGCTCATTGATACCTAC 270136
>seq10
Length=1051362
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | |
Sbjct 358655 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 358714
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| |||| |||||||| ||
Sbjct 358715 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAACGTCT 358773
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | ||||| || | ||||||||||||||||||
Sbjct 358774 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 358833
Query 40878 GG 40879
||
Sbjct 358834 GG 358835
>seq1
Length=4666273
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || || || | ||
Sbjct 4323174 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCC 4323233
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || || | ||||| ||||| |||||| ||||||||
Sbjct 4323234 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 4323293
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| || || ||||| || |||| ||||| ||| ||||||||||
Sbjct 4323294 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323353
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||| | || || ||| | || ||||
Sbjct 4323354 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCG 4323388
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || ||||| | ||
Sbjct 4323757 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCC 4323816
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || |||| ||||| ||||| ||||| |||||||
Sbjct 4323817 GATACCATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCA 4323875
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || ||| |||| || | ||||| ||| || |||||
Sbjct 4323876 GCAGCGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAA 4323935
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| |||| || || || ||
Sbjct 4323936 CATCCAGAAGGAGTCCACCCTTCACCTGGT 4323965
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| || || || || ||| | || || || || |
Sbjct 4323402 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCT 4323461
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| ||||| || || | ||||| ||||| |||||| |||||||
Sbjct 4323462 GATACTATCGACAACG-TCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACCA 4323520
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| || || ||||| || |||| ||||| ||| |||||||||
Sbjct 4323521 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAA 4323580
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || || ||| | || ||||
Sbjct 4323581 CATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCG 4323616
Score = 120 bits (132), Expect = 3e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| | || || || || | |||| | | | | |||||
Sbjct 4322970 ACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCTGACACCATCGACAATGTCAAGTCT 4323029
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| || | ||||| ||||||||||| |||||||||| || || |||| ||| |||||
Sbjct 4323030 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAG 4323089
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||| || | || |||||| ||||||||||||||||||||| |||| || ||
Sbjct 4323090 CAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCCACTCTCCA 4323148
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| |||||||||| || || |||| ||| || || ||||| ||
Sbjct 3064529 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 3064470
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| || ||||||||||||||||| ||| |||| || || || || |
Sbjct 3064469 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAAGAGTCCACCCTTCACCTCGTCCTC 3064410
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 3064409 CGCCTGCGTGGTGGTGG 3064393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515217731625280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |