Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq10 116 3e-21
seq1 111 1e-19
>seq10
Length=1051362
Score = 116 bits (128), Expect = 3e-21
Identities = 137/182 (75%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| |||||| |||||||||||| || || ||| ||||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668
||||| |||||||| || || ||||||||||||| ||| | | || || || || | |
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 358716
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | |||||| |||| ||| | || || || ||||| || || || |
Sbjct 358715 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 358656
Query 118729 AA 118730
||
Sbjct 358655 AA 358654
>seq1
Length=4666273
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||| || || || |||||||| ||| | |||||| |||||
Sbjct 4323382 ACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 4323323
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||||||||||||||| || || || || |||||||||||
Sbjct 4323322 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 4323263
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| ||||| | || | || |||
Sbjct 4323262 ATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTG 4323203
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || || ||||||||
Sbjct 4323202 CCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || ||||||||||| | |||||| ||||||
Sbjct 4323965 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCC 4323906
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| ||||||||| |||| ||||||||||| || ||||| || ||||||||||| |
Sbjct 4323905 AACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 4323846
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || | |||||| || | || | || |||
Sbjct 4323845 ATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTG 4323786
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || || || |||||
Sbjct 4323785 CCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | ||||| || || || |||||||| ||| | |||||| |||||
Sbjct 4323610 ACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 4323551
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||||||||||||||| || || || || ||||||||||||
Sbjct 4323550 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTTGG 4323491
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| || || | | ||| ||||| | ||| | || ||
Sbjct 4323490 ATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAATAGTCTTT 4323431
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 4323430 CCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 104 bits (114), Expect = 2e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| || | || || ||||||
Sbjct 4323154 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCC 4323095
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| ||||||||||| || ||||| ||||||||||||||
Sbjct 4323094 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 4323035
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | | ||| ||||| | ||| | || |||
Sbjct 4323034 ATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTG 4322975
Query 118710 CCGGTCA 118716
|| ||||
Sbjct 4322974 CCAGTCA 4322968
Score = 98.7 bits (108), Expect = 9e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| || |||||||| || | |||||| |||||||||||| || |||
Sbjct 3064426 GTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 3064485
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||| |||| ||||||||||| || || || || ||||||||||||||
Sbjct 3064486 GCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTGT 3064532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829194493776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |