Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq10 116 3e-21 seq1 111 1e-19 >seq10 Length=1051362 Score = 116 bits (128), Expect = 3e-21 Identities = 137/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| |||||| |||||||||||| || || ||| |||| Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 ||||| |||||||| || || ||||||||||||| ||| | | || || || || | | Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 358716 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 358715 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 358656 Query 118729 AA 118730 || Sbjct 358655 AA 358654 >seq1 Length=4666273 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||||| || || || |||||||| ||| | |||||| ||||| Sbjct 4323382 ACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 4323323 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||||||||||||||| || || || || ||||||||||| Sbjct 4323322 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 4323263 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||| | || | || ||| Sbjct 4323262 ATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTG 4323203 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 4323202 CCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || ||||||||||| | |||||| |||||| Sbjct 4323965 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCC 4323906 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| ||||||||| |||| ||||||||||| || ||||| || ||||||||||| | Sbjct 4323905 AACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 4323846 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||| || | |||||| || | || | || ||| Sbjct 4323845 ATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTG 4323786 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || || || ||||| Sbjct 4323785 CCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||||| || || || |||||||| ||| | |||||| ||||| Sbjct 4323610 ACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 4323551 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||||||||||||||| || || || || |||||||||||| Sbjct 4323550 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTTGG 4323491 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| || || | | ||| ||||| | ||| | || || Sbjct 4323490 ATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAATAGTCTTT 4323431 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 4323430 CCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| || | || || |||||| Sbjct 4323154 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCC 4323095 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| ||||||||||| || ||||| |||||||||||||| Sbjct 4323094 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 4323035 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||| ||||| | ||| | || ||| Sbjct 4323034 ATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTG 4322975 Query 118710 CCGGTCA 118716 || |||| Sbjct 4322974 CCAGTCA 4322968 Score = 98.7 bits (108), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || |||||||| || | |||||| |||||||||||| || ||| Sbjct 3064426 GTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 3064485 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||| |||| ||||||||||| || || || || |||||||||||||| Sbjct 3064486 GCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTGT 3064532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829194493776