Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
>seq1
Length=4666273
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| |||| || | |||| ||| ||||| ||||||||||||||
Sbjct 4323400 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323341
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | |||||| || ||||| ||||| ||||||||||| |||
Sbjct 4323340 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323281
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | | || | |||| || || ||
Sbjct 4323280 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACC 4323221
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||||||||| || || || |||||||||||
Sbjct 4323220 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| |||| || | |||| ||| ||||| ||||||||||||||
Sbjct 4323628 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323569
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | |||||| || ||||| ||||| ||||||||||| |||
Sbjct 4323568 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323509
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | ||| | || || ||
Sbjct 4323508 ATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACC 4323449
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || || || ||||| || || || |||||||||||
Sbjct 4323448 TCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | || |||||||| | || || ||||| |||||||| || ||
Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || ||||||||||| || ||||| || || ||||||||||| ||
Sbjct 4323923 AGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323864
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | ||||| || |||||
Sbjct 4323863 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACT 4323804
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || ||||| || ||||| || || ||||| |||||
Sbjct 4323803 TCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| ||| | ||| || ||||| ||||||||||| || || |||| | ||
Sbjct 4323157 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCC 4323098
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| || | || |||||||||
Sbjct 4323097 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 4323038
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | || | || || || |||| ||||||||
Sbjct 4323037 TGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTC 4322978
Query 34358 TTGCCGGT 34365
||||| ||
Sbjct 4322977 TTGCCAGT 4322970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071102263680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |