Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq12 352 3e-92
seq2 114 1e-20
seq1 111 1e-19
>seq12
Length=996256
Score = 352 bits (390), Expect = 3e-92
Identities = 1216/1884 (65%), Gaps = 24/1884 (1%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| || | | | ||| | |||| || || || ||||||||
Sbjct 678133 CTGGTCGACAGTGAACTGGATAGGGGCAGAGGCAGCCATGGTACGCAGGTAGTACATGCC 678074
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
|||||||||||||||||||| | || || || || | || || | ||
Sbjct 678073 AGTCTTCAGACCCATCTTCCAGCCAGCGAAGTGCATACTGGTGATCTTACCCATGGTAGG 678014
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| | ||||| | |||| ||||| |||||| || | || || || || |||||
Sbjct 678013 CTCCTTCATGTGAATGTTGAGAGACTGGGACTGATCAATGTAGGCACCACGGTCAGCGGC 677954
Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344
||| | | | ||||| || |||||||| |||||||||||||| | |||| ||
Sbjct 677953 CATCTGCAGGATGTTACGCTGGGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTC 677894
Query 22345 TAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
|| || | | || | |||||||||| || | | ||||| || || |
Sbjct 677893 AGCGGGGAT-GTTGGGAATGTTCTGGACGGAACCACCCTCGGCGATGATACGGTTCTTCA 677835
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463
| | ||| ||||| || | | || || || || | || | |||| || || |
Sbjct 677834 TGTTGTCGGACCACAGGCCAAGGTCGACCAGGTCCTTCAGAAGCCAAGGGTTGACAACCT 677775
Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523
| ||||| || | |||||| ||||| || ||||| || ||| | || ||||| | |
Sbjct 677774 GGAACTCACCAGCCAAGACACGGCGAGAATAGATGTTCGAGGTGTAGGGCTCGAAGCACT 677715
Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583
| ||| ||||| |||||| ||| || || ||||| || || | || || ||
Sbjct 677714 CGTTGAAGCCCAGAATCTGACTGGTACTGGCAGTGGGCATTGGGGCAACAAGAAGACTGT 677655
Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643
| | || ||| || | || || ||| || | ||||||||| || || | |
Sbjct 677654 TACGCACACCGGTCTCGGCGATCTTGGCCTTCAGAGAAGCCCAGTCCCAGAGGTCAGTGG 677595
Query 22644 GCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCCTTC 22701
| || ||||||||| ||||| |||| | || | | || | ||| ||| |
Sbjct 677594 GAGTGCG---GTCCCACATGTCGTACTGCAGGATACCCTGGGAGACA--GGGGAGCCAGC 677540
Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761
||| || ||||| || || | |||||||| || | || || || ||||
Sbjct 677539 GTAGGTCTCGTAAGGTCCGAGCTTAGCGGCAAGCTCAGAAGAGGCAGTCAGAGCACCGTG 677480
Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821
|| || ||||||||||| | |||||| | ||| || | ||| | ||||
Sbjct 677479 GTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCGGGGGAGTCGAAAGGCAG 677420
Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881
||||| | ||| || || |||| ||| | || || | | |||| || ||||
Sbjct 677419 ACGCAAAGCAAGGAAAGCATCAGCCAAACCGTTGACACCCAGAGCGATGGGACGGTGGCG 677360
Query 22882 CAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939
| || || ||| | |||||||| | ||| || | || ||||| | |||||
Sbjct 677359 GAAGTT--ACTCTTCTTGGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTC 677302
Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGA 22998
| ||| | | || || | | | |||||||| |||| |||
Sbjct 677301 AGGTTACGGACCAGAACCTGGACGACCTCGTGCAGCTTGCCGAAGTCGTACTCGCCACGA 677242
Query 22999 TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056
| |||| || || | || | ||||| | ||||| || || ||||| ||
Sbjct 677241 GCGGCATCAACGAAAGTGGGCAGAGCCAGGGAGGCCAAGTTGCAAACAGCGACCTCATCA 677182
Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116
|| ||||||| | || || || || || ||| | || || |||| ||
Sbjct 677181 GGGGCACTGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTC 677122
Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176
|||||||||| || || ||||| | ||||||||| |||||| | || | || |||||
Sbjct 677121 TTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCA 677062
Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CT 23235
||| | ||||| ||| || ||||| ||||||| | | | ||| ||| | |
Sbjct 677061 GTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGA-AGGTCTTACGGCCACG 677003
Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295
||| || | ||||||||| | ||||| || ||||| || | ||||| |||||| ||
Sbjct 677002 GCCCTCCTTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAG 676943
Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355
|| || | | | || || | ||| |||| || ||||| || ||||
Sbjct 676942 ACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCAT 676883
Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415
|| ||||| || |||| |||||| |||| || || || || || |||||||| || ||
Sbjct 676882 GAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACC 676823
Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475
| |||||| || ||||| || || |||||||| || ||||| ||||| ||||| |
Sbjct 676822 GTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGAT 676763
Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535
|||||| || || || | ||| ||||| ||||| ||||| || || || ||||||||| |
Sbjct 676762 GGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAA 676703
Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAA-C 23594
||| | ||||| || |||| ||||||||| | ||| | |||||| | | | |
Sbjct 676702 CACACGCAGCATAGGAACGATACCGTTGGAGGAACCGT-TGGTACCGCCAATGTAGGAGC 676644
Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654
| | || || | | ||| |||| || || || || || | | || || ||||| |
Sbjct 676643 CAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGG 676584
Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714
| || ||||||||||| ||||| ||||| ||||||||||| || | | |||| ||
Sbjct 676583 CACAGGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGA 676524
Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774
| || |||| || ||| | || ||| |||| ||||||||| ||| ||||| |
Sbjct 676523 AGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGG 676464
Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834
| ||| | | ||||| | | ||| || || ||||| || || ||||| ||||
Sbjct 676463 TGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGT 676404
Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--GACCGTGACGCCGTT 23892
| ||||| | || || ||||||| || || || || | ||| | | | | |||||
Sbjct 676403 GGATACCAACTGCAACACGCATCAACAGGTGCTGGGGACGCTCAGCAACCTTA--CCGTT 676346
Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952
|| || ||| |||||||| | | || || || ||||| ||| |||||||||||
Sbjct 676345 GATGCGGAGCAGGTATGAACGCTCGAGGGTCTTGAAACCAAAGAAGTTGTAGTTAAAGTC 676286
Query 23953 ACGATCGTGCACTATGGCCGAATT 23976
||| |||| || |||||||| ||
Sbjct 676285 ACGGTCGTAAACGATGGCCGAGTT 676262
>seq2
Length=2385438
Score = 114 bits (126), Expect = 1e-20
Identities = 237/349 (68%), Gaps = 8/349 (2%)
Strand=Plus/Plus
Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|||| |||||| || | || | || || |||||||| || ||||| ||||| || |||
Sbjct 270306 CCACCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCT 270365
Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077
|||||| | || || ||| ||||||| || || |||||||| || ||||| || ||
Sbjct 270366 CCTTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCA 270425
Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137
||||| | || || || || ||||||||||| || || || || || || | | ||| |
Sbjct 270426 ACGAGCTTATCTCTCGTGATGAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTTCTCCC 270485
Query 58138 ACATTGTCAATAAACCGACGCGGGATC--GCATCTT--GGACATTATCACCGAGGCGGTC 58193
|| |||| ||||| | | | | | || |||||| || |||||| |||
Sbjct 270486 AC---CTCAA-CAACCGCCCCTCCCCCAAGGTTGTTGAGGACATCATTGTCGAGGCTGTC 270541
Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253
| ||||| | ||||| | || || ||||| || || |||| || ||||||
Sbjct 270542 GGCATCGAGCAGGAGTTCCTGACTGATGCCCTTCCCTGTGCTCTGCTTGGCATGAACGCC 270601
Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302
| | |||| | ||||| ||||| || || ||| | || || |||
Sbjct 270602 AAGCTCATGTGCCAATACATCGAGTTCGTCGCTGACCGTCTCCTGGTCG 270650
Score = 102 bits (112), Expect = 7e-17
Identities = 201/295 (68%), Gaps = 7/295 (2%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| |||||||||| ||||| || || || || ||||| | || || | || |||
Sbjct 269852 ATCTGGCACATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATCTG 269911
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCA---AAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | || || | || |||| | | ||| |
Sbjct 269912 TCCAAGGATCTCCACGACTGGCACAACCGCATGAACGACGATGAGCGTTACTTTGTCTCC 269971
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || |||||||| |||||||||||||| |||||||| ||| | | ||
Sbjct 269972 CACGTCCTTGCTTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCTTG--AGC 270029
Query 57747 TTTTCA--CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804
||||| ||| || || || | ||||| | ||||| ||||| || || | |
Sbjct 270030 GTTTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGA 270089
Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859
| || ||| | || || || | || || || ||||| ||||| ||| | |||||
Sbjct 270090 TGGAGAACATCCACTCGGAGACCTACTCCCTGCTCATTGATACCTACATCAAGGA 270144
>seq1
Length=4666273
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| | |||
Sbjct 4323174 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCC 4323233
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| || | || || ||||||
Sbjct 4323234 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 4323293
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || ||| | || ||| | ||| | ||| || |||
Sbjct 4323294 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323353
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || ||||| ||||||||| |||| || | ||| | || ||||
Sbjct 4323354 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGGTA 4323402
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||||| || ||||| || ||||| | || || || | |||
Sbjct 4323757 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCC 4323816
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | ||||| | || ||||||||| || | || || ||||||
Sbjct 4323817 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 4323876
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || |||||||| || | ||| | ||||| |||
Sbjct 4323877 CAGCGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAAC 4323936
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || || || ||||| ||||| ||
Sbjct 4323937 ATCCAGAAGGAGTCCACCCTTCACCTGGTCCT 4323968
Score = 100 bits (110), Expect = 3e-16
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || || || || || ||| | || || || | ||
Sbjct 4323402 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCT 4323461
Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309
|| | | |||| | ||||| ||| || | | |||||||| || | || || |||
Sbjct 4323462 GATACTATCGACAACGTCAA---GAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGAC 4323518
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || |||||||| || ||| | || ||| | ||| | ||| ||
Sbjct 4323519 CAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTAC 4323578
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||| ||||||||| |||| || | ||| | || ||||
Sbjct 4323579 AACATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGGTA 4323630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765129565760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |