Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq12 352 3e-92 seq2 114 1e-20 seq1 111 1e-19 >seq12 Length=996256 Score = 352 bits (390), Expect = 3e-92 Identities = 1216/1884 (65%), Gaps = 24/1884 (1%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| || | | | ||| | |||| || || || |||||||| Sbjct 678133 CTGGTCGACAGTGAACTGGATAGGGGCAGAGGCAGCCATGGTACGCAGGTAGTACATGCC 678074 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||||||||||||||||| | || || || || | || || | || Sbjct 678073 AGTCTTCAGACCCATCTTCCAGCCAGCGAAGTGCATACTGGTGATCTTACCCATGGTAGG 678014 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | ||||| | |||| ||||| |||||| || | || || || || ||||| Sbjct 678013 CTCCTTCATGTGAATGTTGAGAGACTGGGACTGATCAATGTAGGCACCACGGTCAGCGGC 677954 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | ||||| || |||||||| |||||||||||||| | |||| || Sbjct 677953 CATCTGCAGGATGTTACGCTGGGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTC 677894 Query 22345 TAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 || || | | || | |||||||||| || | | ||||| || || | Sbjct 677893 AGCGGGGAT-GTTGGGAATGTTCTGGACGGAACCACCCTCGGCGATGATACGGTTCTTCA 677835 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | | ||| ||||| || | | || || || || | || | |||| || || | Sbjct 677834 TGTTGTCGGACCACAGGCCAAGGTCGACCAGGTCCTTCAGAAGCCAAGGGTTGACAACCT 677775 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 | ||||| || | |||||| ||||| || ||||| || ||| | || ||||| | | Sbjct 677774 GGAACTCACCAGCCAAGACACGGCGAGAATAGATGTTCGAGGTGTAGGGCTCGAAGCACT 677715 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||| ||||| |||||| ||| || || ||||| || || | || || || Sbjct 677714 CGTTGAAGCCCAGAATCTGACTGGTACTGGCAGTGGGCATTGGGGCAACAAGAAGACTGT 677655 Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 | | || ||| || | || || ||| || | ||||||||| || || | | Sbjct 677654 TACGCACACCGGTCTCGGCGATCTTGGCCTTCAGAGAAGCCCAGTCCCAGAGGTCAGTGG 677595 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCCTTC 22701 | || ||||||||| ||||| |||| | || | | || | ||| ||| | Sbjct 677594 GAGTGCG---GTCCCACATGTCGTACTGCAGGATACCCTGGGAGACA--GGGGAGCCAGC 677540 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| || ||||| || || | |||||||| || | || || || |||| Sbjct 677539 GTAGGTCTCGTAAGGTCCGAGCTTAGCGGCAAGCTCAGAAGAGGCAGTCAGAGCACCGTG 677480 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 || || ||||||||||| | |||||| | ||| || | ||| | |||| Sbjct 677479 GTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCGGGGGAGTCGAAAGGCAG 677420 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 ||||| | ||| || || |||| ||| | || || | | |||| || |||| Sbjct 677419 ACGCAAAGCAAGGAAAGCATCAGCCAAACCGTTGACACCCAGAGCGATGGGACGGTGGCG 677360 Query 22882 CAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 | || || ||| | |||||||| | ||| || | || ||||| | ||||| Sbjct 677359 GAAGTT--ACTCTTCTTGGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTC 677302 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGA 22998 | ||| | | || || | | | |||||||| |||| ||| Sbjct 677301 AGGTTACGGACCAGAACCTGGACGACCTCGTGCAGCTTGCCGAAGTCGTACTCGCCACGA 677242 Query 22999 TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 | |||| || || | || | ||||| | ||||| || || ||||| || Sbjct 677241 GCGGCATCAACGAAAGTGGGCAGAGCCAGGGAGGCCAAGTTGCAAACAGCGACCTCATCA 677182 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 || ||||||| | || || || || || ||| | || || |||| || Sbjct 677181 GGGGCACTGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTC 677122 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 |||||||||| || || ||||| | ||||||||| |||||| | || | || ||||| Sbjct 677121 TTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCA 677062 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CT 23235 ||| | ||||| ||| || ||||| ||||||| | | | ||| ||| | | Sbjct 677061 GTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGA-AGGTCTTACGGCCACG 677003 Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295 ||| || | ||||||||| | ||||| || ||||| || | ||||| |||||| || Sbjct 677002 GCCCTCCTTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAG 676943 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355 || || | | | || || | ||| |||| || ||||| || |||| Sbjct 676942 ACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCAT 676883 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 || ||||| || |||| |||||| |||| || || || || || |||||||| || || Sbjct 676882 GAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACC 676823 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 | |||||| || ||||| || || |||||||| || ||||| ||||| ||||| | Sbjct 676822 GTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGAT 676763 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 |||||| || || || | ||| ||||| ||||| ||||| || || || ||||||||| | Sbjct 676762 GGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAA 676703 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAA-C 23594 ||| | ||||| || |||| ||||||||| | ||| | |||||| | | | | Sbjct 676702 CACACGCAGCATAGGAACGATACCGTTGGAGGAACCGT-TGGTACCGCCAATGTAGGAGC 676644 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | | || || | | ||| |||| || || || || || | | || || ||||| | Sbjct 676643 CAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGG 676584 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | || ||||||||||| ||||| ||||| ||||||||||| || | | |||| || Sbjct 676583 CACAGGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGA 676524 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || |||| || ||| | || ||| |||| ||||||||| ||| ||||| | Sbjct 676523 AGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGG 676464 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 | ||| | | ||||| | | ||| || || ||||| || || ||||| |||| Sbjct 676463 TGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGT 676404 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--GACCGTGACGCCGTT 23892 | ||||| | || || ||||||| || || || || | ||| | | | | ||||| Sbjct 676403 GGATACCAACTGCAACACGCATCAACAGGTGCTGGGGACGCTCAGCAACCTTA--CCGTT 676346 Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952 || || ||| |||||||| | | || || || ||||| ||| ||||||||||| Sbjct 676345 GATGCGGAGCAGGTATGAACGCTCGAGGGTCTTGAAACCAAAGAAGTTGTAGTTAAAGTC 676286 Query 23953 ACGATCGTGCACTATGGCCGAATT 23976 ||| |||| || |||||||| || Sbjct 676285 ACGGTCGTAAACGATGGCCGAGTT 676262 >seq2 Length=2385438 Score = 114 bits (126), Expect = 1e-20 Identities = 237/349 (68%), Gaps = 8/349 (2%) Strand=Plus/Plus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| |||||| || | || | || || |||||||| || ||||| ||||| || ||| Sbjct 270306 CCACCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCT 270365 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 |||||| | || || ||| ||||||| || || |||||||| || ||||| || || Sbjct 270366 CCTTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCA 270425 Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137 ||||| | || || || || ||||||||||| || || || || || || | | ||| | Sbjct 270426 ACGAGCTTATCTCTCGTGATGAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTTCTCCC 270485 Query 58138 ACATTGTCAATAAACCGACGCGGGATC--GCATCTT--GGACATTATCACCGAGGCGGTC 58193 || |||| ||||| | | | | | || |||||| || |||||| ||| Sbjct 270486 AC---CTCAA-CAACCGCCCCTCCCCCAAGGTTGTTGAGGACATCATTGTCGAGGCTGTC 270541 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 | ||||| | ||||| | || || ||||| || || |||| || |||||| Sbjct 270542 GGCATCGAGCAGGAGTTCCTGACTGATGCCCTTCCCTGTGCTCTGCTTGGCATGAACGCC 270601 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 | | |||| | ||||| ||||| || || ||| | || || ||| Sbjct 270602 AAGCTCATGTGCCAATACATCGAGTTCGTCGCTGACCGTCTCCTGGTCG 270650 Score = 102 bits (112), Expect = 7e-17 Identities = 201/295 (68%), Gaps = 7/295 (2%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| |||||||||| ||||| || || || || ||||| | || || | || ||| Sbjct 269852 ATCTGGCACATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATCTG 269911 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCA---AAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | || || | || |||| | | ||| | Sbjct 269912 TCCAAGGATCTCCACGACTGGCACAACCGCATGAACGACGATGAGCGTTACTTTGTCTCC 269971 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| |||||||||||||| |||||||| ||| | | || Sbjct 269972 CACGTCCTTGCTTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCTTG--AGC 270029 Query 57747 TTTTCA--CAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 ||||| ||| || || || | ||||| | ||||| ||||| || || | | Sbjct 270030 GTTTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGA 270089 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 | || ||| | || || || | || || || ||||| ||||| ||| | ||||| Sbjct 270090 TGGAGAACATCCACTCGGAGACCTACTCCCTGCTCATTGATACCTACATCAAGGA 270144 >seq1 Length=4666273 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| | || ||||| | ||| Sbjct 4323174 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCC 4323233 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || || |||||| Sbjct 4323234 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 4323293 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || ||| | ||| | ||| || ||| Sbjct 4323294 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323353 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||||||| |||| || | ||| | || |||| Sbjct 4323354 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGGTA 4323402 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || ||||| | || || || | ||| Sbjct 4323757 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCC 4323816 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || ||||||||| || | || || |||||| Sbjct 4323817 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 4323876 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || |||||||| || | ||| | ||||| ||| Sbjct 4323877 CAGCGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAAC 4323936 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || || ||||| ||||| || Sbjct 4323937 ATCCAGAAGGAGTCCACCCTTCACCTGGTCCT 4323968 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || || ||| | || || || | || Sbjct 4323402 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCT 4323461 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGAC 31309 || | | |||| | ||||| ||| || | | |||||||| || | || || ||| Sbjct 4323462 GATACTATCGACAACGTCAA---GAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGAC 4323518 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || |||||||| || ||| | || ||| | ||| | ||| || Sbjct 4323519 CAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTAC 4323578 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||| ||||||||| |||| || | ||| | || |||| Sbjct 4323579 AACATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGGTA 4323630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765129565760