Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 8e-14 seq2 91.5 3e-13 >seq12 Length=996256 Score = 93.3 bits (102), Expect = 8e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| |||||||| || || || ||| ||||| ||||| |||||||||||| Sbjct 676608 CCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCAATG 676549 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | | |||||||| || | | |||||| | || || Sbjct 676548 CTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCG 676489 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || ||||||||||||||||| ||||| || | | | ||||| | | || || ||| Sbjct 676488 TTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCA 676429 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 ||| | || ||| || ||||| || || || || |||||||| | || || ||| Sbjct 676428 ATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATCAACAGGTGCTGG 676369 Query 95032 GGGCGCTCA 95040 || |||||| Sbjct 676368 GGACGCTCA 676360 >seq2 Length=2385438 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||||||||| || ||||| || |||||||| ||| | || || || || |||||| Sbjct 270326 GTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTATCTTCTGG 270385 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | ||| | |||||||||| || | |||||| ||| | || ||| | || Sbjct 270386 CTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGAT 270445 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || |||||| || || |||| || Sbjct 270446 GAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTT 270480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581109177740