Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq12 93.3 8e-14
seq2 91.5 3e-13
>seq12
Length=996256
Score = 93.3 bits (102), Expect = 8e-14
Identities = 170/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||| || || || ||| ||||| ||||| ||||||||||||
Sbjct 676608 CCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCAATG 676549
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911
|| || || | | | | |||||||| || | | |||||| | || ||
Sbjct 676548 CTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCG 676489
Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971
|| ||||||||||||||||| ||||| || | | | ||||| | | || || |||
Sbjct 676488 TTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCA 676429
Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031
||| | || ||| || ||||| || || || || |||||||| | || || |||
Sbjct 676428 ATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATCAACAGGTGCTGG 676369
Query 95032 GGGCGCTCA 95040
|| ||||||
Sbjct 676368 GGACGCTCA 676360
>seq2
Length=2385438
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| || ||||| || |||||||| ||| | || || || || ||||||
Sbjct 270326 GTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTATCTTCTGG 270385
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | ||| | |||||||||| || | |||||| ||| | || ||| | ||
Sbjct 270386 CTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGAT 270445
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| ||||| || |||||| || || |||| ||
Sbjct 270446 GAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTT 270480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581109177740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |