Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq12 147 3e-30 >seq12 Length=996256 Score = 147 bits (162), Expect = 3e-30 Identities = 434/663 (65%), Gaps = 6/663 (1%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || |||| ||| || || ||||| || |||||||| |||| ||||| | || Sbjct 676912 CCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAA 676853 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | | ||||| || || ||||| || || | |||| | | Sbjct 676852 GAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 676793 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | || | ||||| || || | ||| ||||| | | || || || ||||| || || Sbjct 676792 CACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 676733 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | || | ||||||||| || | || | || ||| |||| |||||||| || Sbjct 676732 CTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGA 676673 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA--TTGATAGA 63545 ||| ||||||||| || ||| ||| | ||||| || | || | || Sbjct 676672 GGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCA-AG- 676615 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 || || || || || | || || || | || || || | ||||||||||| || Sbjct 676614 CCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCC 676555 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || ||||| || || |||| | || || || || || || |||| || || ||| Sbjct 676554 TCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTA 676495 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 || || || || | || || |||||||| || || | || | || | | | ||| Sbjct 676494 CCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAG 676435 Query 63726 GTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACAT 63784 |||||||| || || |||||| || | || || || ||||| |||||||| |||| Sbjct 676434 GTCTCAATGGCCTTTTCGATATCCTCACCG-TGGATACCAACTGCAACACGCATCAACAG 676376 Query 63785 GTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63844 |||||| || | ||| ||| || ||| || | || ||| || || | || Sbjct 676375 GTGCTGGGGACGCTCAGCAACCTTACCGTTGATGCGGAGCAGGTATGAACGCTCGAGGGT 676316 Query 63845 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTT 63904 || |||||||| ||||||| |||||| || ||||||| || |||| ||||||| Sbjct 676315 CTTGAAACCAAAGAAGTTGTAGTTAAAGTCACGGTCGTAAACGATGGCCGAGTTGAGCTC 676256 Query 63905 ATC 63907 ||| Sbjct 676255 ATC 676253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815805019840