Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 134 2e-26 seq2 129 9e-25 >seq12 Length=996256 Score = 134 bits (148), Expect = 2e-26 Identities = 303/449 (67%), Gaps = 10/449 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| ||| Sbjct 676730 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCCGAC 676789 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || ||||||| ||| || || |||| || || | || Sbjct 676790 GTGTTCGAGTTCTTGGACCTGCGCAAGAACCACGGTAAGGAGGAGGTTCGTGCTCGTGAT 676849 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || | || || ||| || ||| ||||||||||||| || | | |||||| Sbjct 676850 CTCTTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCCAACGGTG-- 676907 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | |||||| || | | || ||||| |||| || ||||| ||| Sbjct 676908 -ACTGGACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGCGAGGAG 676966 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 ||||| || |||| | |||||| | |||||||| ||| |||| || | || Sbjct 676967 TTTGATGCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGAC-CTTCAAGGC 677025 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| |||||| | |||||| | ||||||| |||||||| | || | ||| | Sbjct 677026 TC-AGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGC 677084 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||||||| | || ||||| |||||||| || |||| ||||| ||| Sbjct 677085 TTTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATTCGCAGCT 677144 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||| || ||||| || || | |||||| Sbjct 677145 CCAACCTTTGCACTGAGATCATTGAGTAC 677173 >seq2 Length=2385438 Score = 129 bits (142), Expect = 9e-25 Identities = 203/288 (70%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | || ||| | |||||| Sbjct 269852 ATCTGGCACATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCAGAGGAGATTGATCTG 269911 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || ||| || |||||| | ||| | || Sbjct 269912 TCCAAGGATCTCCACGACTGGCACAACCGCATGAACGACGATGAGCGTTACTTTGTCTCC 269971 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 ||| | | || ||||| |||| ||||||||| || |||||||| || || |||| || Sbjct 269972 CACGTCCTTGCTTTCTTCGCCGCCTCCGATGGTATTGTCAACGAGAACTTGCTTGA-GCG 270030 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | |||| | | || |||| ||||| ||||| ||||| |||||||| Sbjct 270031 TTTCAGTGGAGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGAT 270090 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | |||||||| | ||||| || ||||| | ||||| Sbjct 270091 GGAGAACATCCACTCGGAGACCTACTCCCTGCTCATTGATACCTACAT 270138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057087981280