Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 111 4e-19 >seq1 Length=4666273 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| || || ||||| || ||||| | |||||| || || || || ||| Sbjct 4323598 GTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTACCA 4323539 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || || || ||||| ||| || Sbjct 4323538 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTTGGATCTT-GCTCTT 4323480 Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||||| | || ||||| || ||||||||||| ||||| || || Sbjct 4323479 GACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAATAGTCTTTCCAGTGAGGGT 4323420 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 4323419 CTTGACGAAGATCTGCAT 4323402 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || || ||||| | ||| || || | || |||||| Sbjct 4323953 GTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCA 4323894 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| || || ||||| || || || || ||||||||| ||||| || Sbjct 4323893 GCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 4323835 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||||||| || || || || | || |||||||| |||||||| || Sbjct 4323834 GACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGT 4323775 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 4323774 CTTGACGAAGATTTGCAT 4323757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395036477424