Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 4e-19
>seq1
Length=4666273
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| ||||| || || ||||| || ||||| | |||||| || || || || |||
Sbjct 4323598 GTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTACCA 4323539
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || || || || ||||| ||| ||
Sbjct 4323538 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTTGGATCTT-GCTCTT 4323480
Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||||| | || ||||| || ||||||||||| ||||| || ||
Sbjct 4323479 GACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAATAGTCTTTCCAGTGAGGGT 4323420
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 4323419 CTTGACGAAGATCTGCAT 4323402
Score = 107 bits (118), Expect = 4e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || || || || ||||| | ||| || || | || ||||||
Sbjct 4323953 GTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCA 4323894
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | ||| || || ||||| || || || || ||||||||| ||||| ||
Sbjct 4323893 GCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 4323835
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||||||| || || || || | || |||||||| |||||||| ||
Sbjct 4323834 GACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGT 4323775
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 4323774 CTTGACGAAGATTTGCAT 4323757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395036477424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |