Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=4666273 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576 || |||||||| || ||||| || |||||||| || | | | || || ||||||| Sbjct 4323382 ACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG-CGACCGTCCTC 4323324 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| || | || | ||||||||| ||| || | || ||||||||| Sbjct 4323323 AAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 4323264 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | ||||| |||| |||||| ||| | || ||||| || Sbjct 4323263 GATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTT 4323204 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || || || |||||||| Sbjct 4323203 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| ||| |||||| || ||||||||||| | | | || || | ||||||| ||| Sbjct 4323959 TGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTG-CGACCATCCTCCAACTG 4323901 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || || | || | ||||||||| ||| || | || ||||||||| ||| || Sbjct 4323900 CTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTT 4323841 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || |||||||||| |||||| || | || || || || || Sbjct 4323840 GCTCTTGACGTTGTCG--ATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCA 4323783 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || || || || ||||| Sbjct 4323782 GTAAGAGTCTTGACGAAGATTTGCAT 4323757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250029448228