Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 185 1e-42
>seq1
Length=4666273
Score = 185 bits (204), Expect = 1e-42
Identities = 204/269 (76%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | ||||| | || || ||||| || || ||||||||||| ||||
Sbjct 3770397 CGCCAAGCGTCACCGTAAGATCT-TGCGCGACAACATTCAGGGTATCACCAAGCCCGCTA 3770339
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| ||||| |||||||| ||||||||| |||||| || |||| || ||||
Sbjct 3770338 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 3770279
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | |||| ||||| || |||| |||| ||| || || ||| ||||
Sbjct 3770278 CCCGCGGTGTCCTCAAGACTTTCCTGGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 3770219
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||||||| | || |||||||||| | || || || |
Sbjct 3770218 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCCCTCAAGCGCCAGG 3770159
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| || |||||
Sbjct 3770158 GCCGTACCCTCTACGGTTTCGGTGGTTAA 3770130
Score = 176 bits (194), Expect = 7e-40
Identities = 191/251 (76%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| | | || || |||||||| || ||||||||||| ||||
Sbjct 2557098 CGCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 2557156
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| ||||| |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 2557157 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 2557216
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | |||| ||||||| || ||||||| ||| || || ||| || |
Sbjct 2557217 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGTGACGCCGTCACCTACACTG 2557276
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || |||||||| || ||| | || | ||||| || | || || || |
Sbjct 2557277 AGCACGCCAAGCGCAAGACTGTTACTTCCCTTGACGTTGTCTACGCTCTCAAGCGCCAGG 2557336
Query 16671 GCCGTAAGATT 16681
|||||||| ||
Sbjct 2557337 GCCGTAAGTTT 2557347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074991538004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |