Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 185 1e-42 >seq1 Length=4666273 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || ||||| || || ||||||||||| |||| Sbjct 3770397 CGCCAAGCGTCACCGTAAGATCT-TGCGCGACAACATTCAGGGTATCACCAAGCCCGCTA 3770339 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||| |||||||| ||||||||| |||||| || |||| || |||| Sbjct 3770338 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 3770279 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | |||| ||||| || |||| |||| ||| || || ||| |||| Sbjct 3770278 CCCGCGGTGTCCTCAAGACTTTCCTGGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 3770219 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || |||||||||| | || || || | Sbjct 3770218 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCCCTCAAGCGCCAGG 3770159 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| || ||||| Sbjct 3770158 GCCGTACCCTCTACGGTTTCGGTGGTTAA 3770130 Score = 176 bits (194), Expect = 7e-40 Identities = 191/251 (76%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| | | || || |||||||| || ||||||||||| |||| Sbjct 2557098 CGCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 2557156 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 2557157 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 2557216 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| ||||||| || ||||||| ||| || || ||| || | Sbjct 2557217 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGTGACGCCGTCACCTACACTG 2557276 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||| || ||| | || | ||||| || | || || || | Sbjct 2557277 AGCACGCCAAGCGCAAGACTGTTACTTCCCTTGACGTTGTCTACGCTCTCAAGCGCCAGG 2557336 Query 16671 GCCGTAAGATT 16681 |||||||| || Sbjct 2557337 GCCGTAAGTTT 2557347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074991538004