Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq12 158 2e-33 >seq12 Length=996256 Score = 158 bits (174), Expect = 2e-33 Identities = 622/968 (64%), Gaps = 18/968 (2%) Strand=Plus/Minus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || |||| || ||||| || ||||||| || | || | || |||||||||||| Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 || || | || || || | || | || || ||||| ||| || |||||| Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 || ||||| ||||| || ||||||| ||| |||||| || | || || | ||| | | Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACA-G 677033 Query 63078 ACTC-GAGCCTTTA-----TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATAC 63131 || ||||||| | ||| | | |||||| ||| | | | | || | | Sbjct 677032 CTTCTGAGCCTTGAAGGTCTTACGGCCACGGCCCTCCTT-CTCGTACTTCTCGTACAGAG 676974 Query 63132 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191 ||| ||||| || || | || | | | | ||||| || | || || | | Sbjct 676973 CATCA----AACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAAC 676918 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251 | | ||| || |||| ||| || || ||||| || |||||||| |||| ||||| Sbjct 676917 AGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCG 676858 Query 63252 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63311 | || ||||| | | | | ||||| || || ||||| || || | |||| Sbjct 676857 AAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAAC 676798 Query 63312 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63371 | | | || | ||||| || || | ||| ||||| | | || || || ||||| Sbjct 676797 TCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTG 676738 Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431 || ||||| || | || | ||||||||| || | || | || ||| |||| |||||| Sbjct 676737 CCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCG 676678 Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTG 63489 || || ||| ||||||||| || ||| ||| | ||||| || | || Sbjct 676677 TTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTC 676618 Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549 | || || || || || || | || || || | || || || | |||||||||| Sbjct 676617 A-AG-CCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGA 676560 Query 63550 TACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63609 ||||||| ||||| || || |||| | || || || || || || |||| || | Sbjct 676559 TACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAG 676500 Query 63610 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63669 ||| || || || || | || || |||||||| || || | || | || | | | Sbjct 676499 GAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGT 676440 Query 63670 TGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATT 63728 ||| |||||||| || || |||||| || | || || || ||||| |||||||| Sbjct 676439 GGTAGGTCTCAATGGCCTTTTCGATATCCTCACCG-TGGATACCAACTGCAACACGCATC 676381 Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788 |||| |||||| || | ||| | | ||| ||| || | || ||| || || Sbjct 676380 AACAGGTGCTGGGGACGCTCAGCAACCTTACCGTTGATGCGGAGCAGGTATGAACGCTCG 676321 Query 63789 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848 | || || |||||||| ||||||| |||||| || ||||||| || |||||||| Sbjct 676320 AGGGTCTTGAAACCAAAGAAGTTGTAGTTAAAGTCACGGTCGTAAACGATGGCCGAGTTG 676261 Query 63849 AGTTTATC 63856 || | ||| Sbjct 676260 AGCTCATC 676253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945424600480