Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq12 322 1e-82 seq2 86.0 2e-11 >seq12 Length=996256 Score = 322 bits (356), Expect = 1e-82 Identities = 607/880 (69%), Gaps = 16/880 (2%) Strand=Plus/Plus Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486 || ||||| ||| | ||| ||| || || ||||| |||| ||||||||||| ||||| Sbjct 676340 CGCATCAACGGTAAGGTTGCTGAGCGTCCCCAGCACCTGTTGATGCGTGTTGCAGTTGGT 676399 Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-- 363544 ||||| | |||| | || || ||||| || || | ||| | || | | Sbjct 676400 ATCCACGGTGAGGATATCGAAAAGGCCATTGAGACCTACCA-CTTG-ATGTCCCAGAAGT 676457 Query 363545 TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTT 363604 | ||||| ||||| | || ||| ||| ||| || || |||| | ||| || || ||| Sbjct 676458 TCTTCACCCACGCTTCCCCCACACTGTTCAACGCCGGTACTCCTTCTCCCCAATTGGCTT 676517 Query 363605 CTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA 363664 ||||||| || | | |||||||| || ||| |||||||||| |||||| || |||| Sbjct 676518 CTTGCTTCCTGGTTGATATGAAGGAGGACAGCATTGAGGGTATCTATGACACTCTGAAGA 676577 Query 363665 ATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGT 363723 ||||| | |||||||||| || || || ||||| | | || ||||| | ||| Sbjct 676578 CCTGTGCCATGATTTCCAAGACCGCTGGTGGTATTGGCTTGAACG-TCCACCGCATCCGT 676636 Query 363724 GC-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCT 363782 || || | | |||||| |||| || || | ||| || || | ||||| ||||| Sbjct 676637 GCTACTGG-CTCCTACATTGGCGGTACCAACGGTTCCTCCAACGGTATCGTTCCTATGCT 676695 Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842 |||||||| |||| || || | || |||||||||||||| |||||| || || Sbjct 676696 GCGTGTGTTCAACAACACCGCTCGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGTGC 676755 Query 363843 GTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA 363902 ||||| || || || ||||| || ||||| | || ||||| | || || || || Sbjct 676756 CTTTGCCATCTACCTTGAGCCCTGGCACGCCGACGTGTTCGAGTTCTTGGACCTGCGCAA 676815 Query 363903 AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGA 363962 ||| || || ||||| | ||||| |||||||| |||| || || ||| |||| Sbjct 676816 GAACCACGGTAAGGAGGAGGTTCGTGCTCGTGATCTCTTCTTCGCTCTGTGGACCCCTGA 676875 Query 363963 CCATTTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGA 364019 | || |||||||| || ||||| ||| | ||| | || || ||||| |||| Sbjct 676876 TCTGTTCATGAAGCGTGTTGAGGCCAACGGTGAC---TGGACTCTGTTCTGCCCCAACGA 676932 Query 364020 ATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 || |||||| |||| || | || || || | || |||||| ||||| ||||| || Sbjct 676933 GGCCCCTGGTCTTGCCGACGTCTACGGCGAGGAGTTTGATGCTCTGTACGAGAAGTACGA 676992 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 |||||| | |||||||| | || |||||||| |||| ||||||| | || Sbjct 676993 GAAGGAGGGCCGTGGCCGTAAGACCTTCAAGGCTCAGAAGCTGTGGTATGCCATCCTCGA 677052 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | |||| |||||| || | |||| ||| | ||||| ||| | |||||||||||| Sbjct 677053 GGCTCAGACTGAGACTGGTAACCCCTTCATGCTTTACAAGGATGCTTGCAACCGCAAGAG 677112 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258 ||||||| || |||| ||||| |||| |||| |||||| || || ||||| ||||| | Sbjct 677113 CAACCAGAAGAACCTGGGTACCATTC-GCAGCTCCAACCTTTGCACTGAGATCATTGAGT 677171 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 ||| || || || ||| || || || ||| | || || Sbjct 677172 ACAGTGCCCCTGATGAGGTCGCTGTTTGCAACTTGGCCTC 677211 Score = 98.7 bits (108), Expect = 3e-15 Identities = 266/407 (65%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || |||||||| || ||| ||||| || || ||||||||||||||| || Sbjct 677669 GCCCCAATGCCCACTGCCAGTACCAGTCAGATTCTGGGCTTCAACGAGTGCTTCGAGCCC 677728 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || || | ||||| ||||| || | | || || || | ||| || || Sbjct 677729 TACACCTCGAACATCTATTCTCGCCGTGTCTTGGCTGGTGAGTTCCAGGTTGTCAACCCT 677788 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || | ||||| || ||||| || |||||| |||| |||||||||| |||| Sbjct 677789 TGGCTTCTGAAGGACCTGGTCGACCTTGGCCTGTGGTCCGACAACATGAAGAACCGTATC 677848 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 ||||||| |||||| || ||||||||||| | || | || | ||| | | Sbjct 677849 ATCGCCGAGGGTGGTTCCGTCCAGAACATTCCCAACATCCCCGCTGACATCAAGGCCCTG 677908 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 ||||| ||||| |||||||| ||| ||| | || | | ||||| || || || ||| Sbjct 677909 TACAAGACCGTTTGGGAAATCTCCCAGCGTAACATCCTGCAGATGGCCGCTGACCGTGGT 677968 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || | || |||| |||||| | ||| | ||||| |||| ||| | ||| Sbjct 677969 GCCTACATTGATCAGTCCCAGTCTCTCAACATTCACATGAAGGAGCCTACCATGGGTAAG 678028 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || ||||| ||| || ||||| ||||| ||||| || Sbjct 678029 ATCACCAGTATGCACTTCGCTGGCTGGAAGATGGGTCTGAAGACTGG 678075 >seq2 Length=2385438 Score = 86.0 bits (94), Expect = 2e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542 ||||| | ||||| |||| ||||| | ||||| || || ||||| ||||| | ||| Sbjct 270311 TTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTT 270370 Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602 | ||||| ||||| || || |||| | ||||| ||||| || || || || ||| Sbjct 270371 GCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCCAACGAG 270430 Query 22603 TTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 | || || ||||||||||| || ||||| || || ||| |||| Sbjct 270431 CTTATCTCTCGTGATGAGGGTCTCCACACCGACTTCGCCTGTCTGCT 270477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349792578296