Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq82 140 2e-28
seq8 93.3 3e-14
seq1 84.2 1e-11
>seq82
Length=8932
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 7790 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 7731
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 7730 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7696
>seq8
Length=1432551
Score = 93.3 bits (102), Expect = 3e-14
Identities = 207/309 (67%), Gaps = 4/309 (1%)
Strand=Plus/Plus
Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGG 6244
|||| | ||| | |||||||||||||| ||| | | | |||| | ||| | |||||
Sbjct 219550 ATGTCACCGACCCCTTCTACCGCTACAAGATG--GAGAAGCTGCAGTCAAAGATTGAGGG 219607
Query 6245 TAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGG 6304
||||| |||||||| || ||||| |||||||| || | ||||| | | ||| |
Sbjct 219608 CAAGGGTAACGGTATCAAGACCGTTGTTGTCAACCTGGCCTCTGTCGCCCACTCTCTCAG 219667
Query 6305 ACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTT 6364
|| ||| | ||||| || || || ||||| | ||||| || || ||| | |
Sbjct 219668 CCGTCCTCCTGCCTACGTGATCAAGTACTTCGGTTTTGAACTCGGTGCCCAGGCTAACGC 219727
Query 6365 TGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424
| | || |||| |||| ||| | ||||| | || | ||| |||||| |||||
Sbjct 219728 CAAGCCCACCGACGACCGCTGGATCATCAACGGTGCCCACGATGCTGGCAAGCTCCAGGA 219787
Query 6425 CTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
|| || || || || || |||||| || || || | | ||| | ||||| |||||
Sbjct 219788 CTACCTCGATGGTTTCATCTCCAAGTTCGTTCTCTGCAAGCAGTGCAAGAACCCAGAGAC 219847
Query 6485 CGAGCTTAT 6493
|| ||||
Sbjct 219848 TGATGTTAT 219856
>seq1
Length=4666273
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||||| |||||||||||||| ||||| || || ||||| || |
Sbjct 4323402 TACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGG 4323343
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | || |||| || | || || || || || || || || || || || | ||
Sbjct 4323342 AGAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGG 4323283
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || || |||||| || || ||||||||| | || || || | ||||
Sbjct 4323282 GGATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAA 4323223
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | ||| || ||||| ||||||||
Sbjct 4323222 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946269265468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |