Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq82 140 2e-28 seq8 93.3 3e-14 seq1 84.2 1e-11 >seq82 Length=8932 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 7790 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 7731 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 7730 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7696 >seq8 Length=1432551 Score = 93.3 bits (102), Expect = 3e-14 Identities = 207/309 (67%), Gaps = 4/309 (1%) Strand=Plus/Plus Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGG 6244 |||| | ||| | |||||||||||||| ||| | | | |||| | ||| | ||||| Sbjct 219550 ATGTCACCGACCCCTTCTACCGCTACAAGATG--GAGAAGCTGCAGTCAAAGATTGAGGG 219607 Query 6245 TAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGG 6304 ||||| |||||||| || ||||| |||||||| || | ||||| | | ||| | Sbjct 219608 CAAGGGTAACGGTATCAAGACCGTTGTTGTCAACCTGGCCTCTGTCGCCCACTCTCTCAG 219667 Query 6305 ACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTT 6364 || ||| | ||||| || || || ||||| | ||||| || || ||| | | Sbjct 219668 CCGTCCTCCTGCCTACGTGATCAAGTACTTCGGTTTTGAACTCGGTGCCCAGGCTAACGC 219727 Query 6365 TGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424 | | || |||| |||| ||| | ||||| | || | ||| |||||| ||||| Sbjct 219728 CAAGCCCACCGACGACCGCTGGATCATCAACGGTGCCCACGATGCTGGCAAGCTCCAGGA 219787 Query 6425 CTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 || || || || || || |||||| || || || | | ||| | ||||| ||||| Sbjct 219788 CTACCTCGATGGTTTCATCTCCAAGTTCGTTCTCTGCAAGCAGTGCAAGAACCCAGAGAC 219847 Query 6485 CGAGCTTAT 6493 || |||| Sbjct 219848 TGATGTTAT 219856 >seq1 Length=4666273 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || ||||| |||||||||||||| ||||| || || ||||| || | Sbjct 4323402 TACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGG 4323343 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || |||| || | || || || || || || || || || || || | || Sbjct 4323342 AGAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGG 4323283 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || |||||| || || ||||||||| | || || || | |||| Sbjct 4323282 GGATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAA 4323223 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | ||| || ||||| |||||||| Sbjct 4323222 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946269265468