Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=2385438 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| ||||| || | ||| || || | || || |||| |||||||| || ||| Sbjct 270138 ATGTAGGTATCAATGAGCAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGG 270079 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | || || | || ||| || ||| | || | ||| | | Sbjct 270078 AAACCGTAGAAGCAGCGGGCCTCGGGGACCTGAACCTCTCCACTGAAACGCTCAAGCAAG 270019 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| ||||||||||| || || || ||||| | | || | ||| | Sbjct 270018 TTCTCGTTGACAATACCATCGGAGGCGGCGAAGAAAGCAAGGACGTGGGAGACAAAGTAA 269959 Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 |||||| || || | | || | ||| ||| ||||| || || ||||| | || Sbjct 269958 CGCTCATCGTCGTTCATGCGGTTGTGCCAGTCGTGGAGATCCTTGGACAGATCAATCTCC 269899 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || ||||||| || || || || || || |||||||| | ||| || Sbjct 269898 TCTGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATGTGCCAGAT 269852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859212946720