Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq10 91.5 1e-13 >seq1 Length=4666273 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || || ||||| | ||||| || | || Sbjct 4323757 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCC 4323816 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||| |||||||||||||| || || || || Sbjct 4323817 GATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 4323876 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||||| |||||| ||||| |||| ||||||||| Sbjct 4323877 CAGCGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAAC 4323936 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | || | || | || ||||||| || Sbjct 4323937 ATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTGCGCGGTGG 4323983 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||||||||| || || | || Sbjct 4323174 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCC 4323233 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || || |||||||||||||| || || || || Sbjct 4323234 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 4323293 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||| ||||||| |||||| Sbjct 4323294 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323353 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | ||||| || |||| |||| || ||| Sbjct 4323354 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGGT 4323401 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || | || || || ||||| || | Sbjct 4323402 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCT 4323461 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || ||||||||||||||||| || || || || Sbjct 4323462 GATACTATCGACAACGTCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACCAG 4323521 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||| ||||||| |||||| Sbjct 4323522 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323581 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | ||||| || |||| |||| || ||| Sbjct 4323582 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGGT 4323629 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| | || || || || | || ||| | ||| || |||| Sbjct 4322970 ACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCTGACACCATCGACAATGTCAAGTCT 4323029 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || || ||||| || || |||||||| Sbjct 4323030 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAG 4323089 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||| ||| |||| || |||||||| || || || ||||| Sbjct 4323090 CAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCCAC 4323142 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || || || || || ||||| || || || || || ||| | || Sbjct 3064530 AGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGA 3064471 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || || |||||||| || ||||| |||||| Sbjct 3064470 GGATGGCCGCACTCTTTCGGACTACAACATCCAGAAAGAGTCCACC 3064425 >seq10 Length=1051362 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 358654 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 358713 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| ||||| || ||||| |||||||| Sbjct 358714 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAACGTCT 358773 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | |||||| |||||| | ||| |||||||| || || Sbjct 358774 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 358833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726833680820