Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 4e-36
seq2 149 1e-30
seq10 132 9e-26
>seq1
Length=4666273
Score = 167 bits (184), Expect = 4e-36
Identities = 178/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | || ||||| || || | |||| ||| || |||||||| || |||||||| |
Sbjct 4323991 TTTACTGGCCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGT 4323932
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
|||| ||||| || | ||||| || |||||||| || ||||| || || | || ||||
Sbjct 4323931 AATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGT 4323872
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || || || || |||||||| |||||||| ||||||| |||||||| || | |
Sbjct 4323871 CCGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTATCGGAAG 4323812
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| ||||| || || || || || ||||||||||| || |||||
Sbjct 4323811 ACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| ||||| || || || || || || |||||||| || ||||||
Sbjct 4323628 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323569
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| ||||| | || ||||| || ||
Sbjct 4323568 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323509
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| ||||||| ||||| || || | || || ||
Sbjct 4323508 ATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACC 4323449
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||| || || ||||| ||||||||||||||||| ||||||||
Sbjct 4323448 TCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| ||||| || || || || || || |||||||| || ||||||
Sbjct 4323400 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323341
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| ||||| | || ||||| || ||
Sbjct 4323340 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323281
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||| || ||||||||||| | || || ||
Sbjct 4323280 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACC 4323221
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||||||||||||||| ||||||||
Sbjct 4323220 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || |||||||| || |||||||| || || |||
Sbjct 4323172 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 4323113
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || ||||| || ||
Sbjct 4323112 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323053
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 4323052 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAACC 4322993
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|||||||||||||| || || ||
Sbjct 4322992 TCCAAGGTGATGGTCTTGCCAGT 4322970
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || ||||||||||| |||||||| || || ||
Sbjct 3064396 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAA 3064455
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || ||
Sbjct 3064456 AGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 3064515
Query 68355 ATGCCTTCCTTGTCT 68369
|| || |||||||||
Sbjct 3064516 ATACCCTCCTTGTCT 3064530
>seq2
Length=2385438
Score = 149 bits (164), Expect = 1e-30
Identities = 313/467 (67%), Gaps = 0/467 (0%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 270775 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 270716
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || || |||||||||||| |||||||| ||| || | ||| ||| ||
Sbjct 270715 CAGAGAGATAGACTCCATGAAGTCGAAGGGGTTGGTGGCATTGAAGTACTTCTGGTTGCC 270656
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | |||||||| |||||||||||||| |||| ||| || | | |||
Sbjct 270655 GAGAGCGACCAGGAGACGGTCAGCGACGAACTCGATGTATTGGCACATGAGCTTGGCGTT 270596
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || ||||| | ||| || | ||| |||| ||| || |||| ||
Sbjct 270595 CATGCCAAGCAGAGCACAGGGAAGGGCATCAGTCAGGAACTCCTGCTCGATGCCGACAGC 270536
Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAG 10234
|| | | |||| || || || | |||| | ||| | ||| | || | ||
Sbjct 270535 CTCGACAATGATGTCCTCAACAACCTTGGGGGAGGGGCGGTTGTTGAGGTGGGAGAAAAG 270476
Query 10235 GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACC 10294
|| | || | |||||| ||||| || || ||| | ||||||||| |||
Sbjct 270475 CAGACAGGCGAAGTCGGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGT 270416
Query 10295 CAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAA 10354
|||||| ||||| || || || || ||||||||| || | | || || || |||||
Sbjct 270415 CAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAA 270356
Query 10355 CAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
| | |||||| ||| | |||| || || |||| |||||||
Sbjct 270355 GAAGATACCCTCAACGGCGGCAAAGGCAACCAGACGCTGGGCGAAGG 270309
>seq10
Length=1051362
Score = 132 bits (146), Expect = 9e-26
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | ||| || || || |||||||| |||||||| || ||||| | ||||||| |||
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 358714
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 358713 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 358655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619773376160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |