Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=4666273 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || ||||| | |||||||| || || |||||||| ||| Sbjct 4323403 ATACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCG 4323344 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| || ||||| || ||||||||| ||||||||||||| |||||||| Sbjct 4323343 GAGAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGG 4323284 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | || | |||||||| || || Sbjct 4323283 GGGATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCA 4323224 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || || |||||||| Sbjct 4323223 ACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || ||||| | |||||||| || || |||||||| ||| Sbjct 4323631 ATACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCG 4323572 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| || ||||| || ||||||||| ||||||||||||| |||||||| Sbjct 4323571 GAGAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGG 4323512 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | || | || || | ||| || Sbjct 4323511 GGGATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCC 4323452 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || || || || || || || |||||||| Sbjct 4323451 ACCTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| ||| ||| || | || || ||| Sbjct 4323953 GTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCA 4323894 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| ||||||||||| || || || ||||| |||||| || Sbjct 4323893 GCGAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTG 4323834 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| |||| || ||||| |||| || | || ||||| || ||||| Sbjct 4323833 ACGTTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTC 4323774 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 4323773 TTGACGAAGATTTGCAT 4323757 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || |||||||| || Sbjct 4323175 ATACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 4323116 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || || ||| |||| |||||||| ||||||||| Sbjct 4323115 GAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGA 4323056 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | |||||| | ||| || Sbjct 4323055 GGGATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCA 4322996 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || |||| ||| | || ||||| |||| Sbjct 4322995 ACCTCCAAGGTGATGGTCTTGCCAGTCA 4322968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133232551536