Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq12 302 8e-77 seq2 232 1e-55 >seq12 Length=996256 Score = 302 bits (334), Expect = 8e-77 Identities = 1030/1579 (65%), Gaps = 57/1579 (4%) Strand=Plus/Minus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTC 243936 |||||| |||||| ||| || | | ||| | || || |||||||| | || || Sbjct 677998 GTTGAGAGACTGGGACTGATCAATGTAGGCACCACGGTCAGCGGCCATCTGCAGGATGTT 677939 Query 243937 CTTCTG--AGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994 ||| |||| || || ||| |||||||| | || ||||| || |||||| | Sbjct 677938 ACGCTGGGAGATTTCCCAAACG--GTCTTGTACAGGGCCTTGATGTCAGCGGGGATG--T 677883 Query 243995 TCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCC 244052 | | |||||||| || || || | | |||||| || | |||||| ||| || Sbjct 677882 TGGGAATGTTCTGGACGGAACCACCCTCGGCGATGATACGGTTCTTCATGTTGTCGGACC 677823 Query 244053 ACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTC 244109 ||||||| | | |||| ||| ||| ||| ||| || ||||| ||||| | Sbjct 677822 ACAGGCCAAGGTCGACCAGGTCCTT---CAGAAGCCAAGGGTTGACAACCTGGAACTCAC 677766 Query 244110 CCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGC 244169 | | || || ||||| |||| ||| | || ||||||| || ||| || || Sbjct 677765 CAGCCAAGACACGGCGAGAATAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGAAGC 677706 Query 244170 CCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGC 244229 |||| ||||| || || ||||| ||||| || | || || |||||||| | ||| | Sbjct 677705 CCAGAATCTGACTGGTACTGGCAGTGGGCATTGGGGCAACAAGAAGACTGTTACGCACAC 677646 Query 244230 CGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGC 244289 || ||| | ||| ||| || | | || | || ||| ||||||| | Sbjct 677645 CGG---TCTCG--GCGA--TCTTGGC-CTTCAGAGAAGCCCAGTCCC-AGAGGTCAGTGG 677595 Query 244290 GTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGG 244349 | || || |||||||||| ||||||| | |||| | ||| ||| ||| |||||| Sbjct 677594 GAGTGCGGTCCCACATGTCGTACTGCAGGATACCCTGGGAGACAGGGGAGCCAGCGTAGG 677535 Query 244350 TCGGGTAGGGACCGTCGCGCTG-GGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTA 244407 || ||| || ||| || | ||| |||| | | | ||| || || ||| ||| Sbjct 677534 TCTCGTAAGGTCCGA-GCTTAGCGGCAAGCTCAGAAGAGGCAGTC-AGAGCACCGTGGTA 677477 Query 244408 GATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGG--GATG 244465 |||||||||||||||| |||||| | ||||| | | || ||| || || | Sbjct 677476 GATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCGGGGGAGTCGAAAGGCAGACG 677417 Query 244466 CCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGC 244525 | | || | ||| | || |||| || | || || | ||||||| | ||| || Sbjct 677416 CAAAGCA--AGGAAAGCATCAGCCAAACCGTTGACACCCAGAGCGATGGGACGGTGGCGG 677359 Query 244526 TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585 ||| | |||| ||||| || ||||| ||||| |||||| | |||||| ||| Sbjct 677358 AAGTTACTCTTCTTGGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAGG 677299 Query 244586 TTGCGGGTGATCATGCGGACGACGTCGGCCAGCA-GCTGAAAGTCGTACTCGTAGGGATC 244644 || ||| | | ||||||| ||| |||| || ||| |||||||||| || | Sbjct 677298 TTACGGACCAGAACCTGGACGACCTCGTGCAGCTTGCCGAA-GTCGTACTCGCCACGAGC 677240 Query 244645 CTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGC 244704 ||| ||| | ||| | | || || | | ||||| |||||| || || Sbjct 677239 ---GGC-------ATCAACG-AAAGTGGGC-AGAGCCAGGGAGGCCAAGTTGCAAACAGC 677192 Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764 ||||| || | | |||||| | ||||| ||||| ||||| || ||||| Sbjct 677191 GACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGT 677132 Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824 ||||||| || || ||| |||| |||||| || |||||||| ||||||||||| Sbjct 677131 ACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTT 677072 Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCT 244884 || ||||| ||| || |||||| | | ||| || | | |||||||| ||| | Sbjct 677071 ACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTT 677012 Query 244885 GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGAC 244944 || | |||||| |||||| |||||| || || ||||| ||| |||| Sbjct 677011 ACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGAC 676952 Query 244945 CTCGTCTAGGCC--GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTG 245002 ||| | || || ||| | || | ||||| | ||| |||| || ||| | ||| Sbjct 676951 GTCGGCAAGACCAGGGGCCTCGTTG--GGGCAGAACAGAGTCCAGTCACCGTTGGCCTCA 676894 Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 || | || |||||| || || ||| |||| || || |||||| || | | | | Sbjct 676893 ACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACC 676834 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || ||| || |||||| | ||| ||||| || || || |||||| ||||||||||| Sbjct 676833 TCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGC 676774 Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG 245182 || | ||||| || | ||| ||||| ||||||||||| |||||||| | | | || Sbjct 676773 TCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGA----CATAGCG 676718 Query 245183 AGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238 |||| |||||| | ||||| |||| || || ||||| ||| |||||||| || Sbjct 676717 AGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGAGGAACCGTTGGTACC 676658 Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTG 245298 ||||||| ||| | | | || | | || | || ||| | || || ||| Sbjct 676657 GCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGT 676598 Query 245299 CTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTT 245358 |||||| || | ||| ||| |||| | ||||| || ||||| ||||||||| ||| Sbjct 676597 CTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTT 676538 Query 245359 CATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGT 245418 ||| | | ||| ||||| || | || ||||| || | | | ||||||||| || Sbjct 676537 CATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGT 676478 Query 245419 GGGGCTGGCGTGGGTAAAG 245437 |||| |||||||| ||| Sbjct 676477 GGGGGAAGCGTGGGTGAAG 676459 >seq2 Length=2385438 Score = 232 bits (256), Expect = 1e-55 Identities = 358/506 (71%), Gaps = 19/506 (4%) Strand=Plus/Plus Query 42648 AAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTG 42707 ||||| |||||||| || ||||||| || || | || |||| | || | ||| Sbjct 270266 AAGGCTGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCCACCTTCGCCCAGCGTCTG 270325 Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 || |||||| ||||||| ||||| ||||||||||| ||| |||| ||||| ||||||||| Sbjct 270326 GTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTATCTTCTGG 270385 Query 42768 CTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 || ||| || ||| | |||||| || || || ||||| ||||| || ||| | || Sbjct 270386 CTGAAGAAGCGTGGTCT-GATGCCTGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGA 270444 Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC 42886 ||||| || || | ||||| ||||| || || ||||| |||||||| || || Sbjct 270445 TGAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTTCTC---CCACCTCAACAACCGCCC 270501 Query 42887 CTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT 42946 ||| || || || |||||| ||||| || | |||||| |||||||||| Sbjct 270502 CTCCCCCAAGGTTGTTGAGGACATCATTGTCGAGGCTGTCGGCATCGAGCAGGAGTTCCT 270561 Query 42947 CACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACA 43005 || | | || ||| ||| | ||| | ||||||||| | | ||||||||| | |||| Sbjct 270562 GACTGATGCCCTTCCCTGTG-CTCTGCTTGGCATGAACGCCAAGCTCATGTGCCAATACA 270620 Query 43006 TCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACA 43059 || ||| |||||| |||| |||||| | | | |||| || || || || Sbjct 270621 TCGAGTTCGTCGCTGACCGTCTCCT------GGTCGCTCTCGGCAACCAGAAGTACTTCA 270674 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 | | | |||||||||||| |||||| ||||| ||| |||||||||||||| | Sbjct 270675 ATGCCACCAACCCCTTCGACTTCATGGAGTCTATCTCTCTGGCTGGCAAGACCAACTTCT 270734 Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| |||| ||||||||| Sbjct 270735 TCGAGAAGCGTGTCGGTGACTACCAG 270760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336508633280