Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq12 302 8e-77
seq2 232 1e-55
>seq12
Length=996256
Score = 302 bits (334), Expect = 8e-77
Identities = 1030/1579 (65%), Gaps = 57/1579 (4%)
Strand=Plus/Minus
Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTC 243936
|||||| |||||| ||| || | | ||| | || || |||||||| | || ||
Sbjct 677998 GTTGAGAGACTGGGACTGATCAATGTAGGCACCACGGTCAGCGGCCATCTGCAGGATGTT 677939
Query 243937 CTTCTG--AGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994
||| |||| || || ||| |||||||| | || ||||| || |||||| |
Sbjct 677938 ACGCTGGGAGATTTCCCAAACG--GTCTTGTACAGGGCCTTGATGTCAGCGGGGATG--T 677883
Query 243995 TCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCC 244052
| | |||||||| || || || | | |||||| || | |||||| ||| ||
Sbjct 677882 TGGGAATGTTCTGGACGGAACCACCCTCGGCGATGATACGGTTCTTCATGTTGTCGGACC 677823
Query 244053 ACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTC 244109
||||||| | | |||| ||| ||| ||| ||| || ||||| ||||| |
Sbjct 677822 ACAGGCCAAGGTCGACCAGGTCCTT---CAGAAGCCAAGGGTTGACAACCTGGAACTCAC 677766
Query 244110 CCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGC 244169
| | || || ||||| |||| ||| | || ||||||| || ||| || ||
Sbjct 677765 CAGCCAAGACACGGCGAGAATAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGAAGC 677706
Query 244170 CCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGC 244229
|||| ||||| || || ||||| ||||| || | || || |||||||| | ||| |
Sbjct 677705 CCAGAATCTGACTGGTACTGGCAGTGGGCATTGGGGCAACAAGAAGACTGTTACGCACAC 677646
Query 244230 CGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGC 244289
|| ||| | ||| ||| || | | || | || ||| ||||||| |
Sbjct 677645 CGG---TCTCG--GCGA--TCTTGGC-CTTCAGAGAAGCCCAGTCCC-AGAGGTCAGTGG 677595
Query 244290 GTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGG 244349
| || || |||||||||| ||||||| | |||| | ||| ||| ||| ||||||
Sbjct 677594 GAGTGCGGTCCCACATGTCGTACTGCAGGATACCCTGGGAGACAGGGGAGCCAGCGTAGG 677535
Query 244350 TCGGGTAGGGACCGTCGCGCTG-GGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTA 244407
|| ||| || ||| || | ||| |||| | | | ||| || || ||| |||
Sbjct 677534 TCTCGTAAGGTCCGA-GCTTAGCGGCAAGCTCAGAAGAGGCAGTC-AGAGCACCGTGGTA 677477
Query 244408 GATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGG--GATG 244465
|||||||||||||||| |||||| | ||||| | | || ||| || || |
Sbjct 677476 GATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCGGGGGAGTCGAAAGGCAGACG 677417
Query 244466 CCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGC 244525
| | || | ||| | || |||| || | || || | ||||||| | ||| ||
Sbjct 677416 CAAAGCA--AGGAAAGCATCAGCCAAACCGTTGACACCCAGAGCGATGGGACGGTGGCGG 677359
Query 244526 TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585
||| | |||| ||||| || ||||| ||||| |||||| | |||||| |||
Sbjct 677358 AAGTTACTCTTCTTGGCCTCGGGAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAGG 677299
Query 244586 TTGCGGGTGATCATGCGGACGACGTCGGCCAGCA-GCTGAAAGTCGTACTCGTAGGGATC 244644
|| ||| | | ||||||| ||| |||| || ||| |||||||||| || |
Sbjct 677298 TTACGGACCAGAACCTGGACGACCTCGTGCAGCTTGCCGAA-GTCGTACTCGCCACGAGC 677240
Query 244645 CTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGC 244704
||| ||| | ||| | | || || | | ||||| |||||| || ||
Sbjct 677239 ---GGC-------ATCAACG-AAAGTGGGC-AGAGCCAGGGAGGCCAAGTTGCAAACAGC 677192
Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764
||||| || | | |||||| | ||||| ||||| ||||| || |||||
Sbjct 677191 GACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGT 677132
Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824
||||||| || || ||| |||| |||||| || |||||||| |||||||||||
Sbjct 677131 ACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTT 677072
Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCT 244884
|| ||||| ||| || |||||| | | ||| || | | |||||||| ||| |
Sbjct 677071 ACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTT 677012
Query 244885 GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGAC 244944
|| | |||||| |||||| |||||| || || ||||| ||| ||||
Sbjct 677011 ACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGAC 676952
Query 244945 CTCGTCTAGGCC--GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTG 245002
||| | || || ||| | || | ||||| | ||| |||| || ||| | |||
Sbjct 676951 GTCGGCAAGACCAGGGGCCTCGTTG--GGGCAGAACAGAGTCCAGTCACCGTTGGCCTCA 676894
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
|| | || |||||| || || ||| |||| || || |||||| || | | | |
Sbjct 676893 ACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACC 676834
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| ||| || |||||| | ||| ||||| || || || |||||| |||||||||||
Sbjct 676833 TCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGC 676774
Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG 245182
|| | ||||| || | ||| ||||| ||||||||||| |||||||| | | | ||
Sbjct 676773 TCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGA----CATAGCG 676718
Query 245183 AGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238
|||| |||||| | ||||| |||| || || ||||| ||| |||||||| ||
Sbjct 676717 AGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGAGGAACCGTTGGTACC 676658
Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTG 245298
||||||| ||| | | | || | | || | || ||| | || || |||
Sbjct 676657 GCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGT 676598
Query 245299 CTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTT 245358
|||||| || | ||| ||| |||| | ||||| || ||||| ||||||||| |||
Sbjct 676597 CTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTT 676538
Query 245359 CATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGT 245418
||| | | ||| ||||| || | || ||||| || | | | ||||||||| ||
Sbjct 676537 CATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGT 676478
Query 245419 GGGGCTGGCGTGGGTAAAG 245437
|||| |||||||| |||
Sbjct 676477 GGGGGAAGCGTGGGTGAAG 676459
>seq2
Length=2385438
Score = 232 bits (256), Expect = 1e-55
Identities = 358/506 (71%), Gaps = 19/506 (4%)
Strand=Plus/Plus
Query 42648 AAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTG 42707
||||| |||||||| || ||||||| || || | || |||| | || | |||
Sbjct 270266 AAGGCTGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCCACCTTCGCCCAGCGTCTG 270325
Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767
|| |||||| ||||||| ||||| ||||||||||| ||| |||| ||||| |||||||||
Sbjct 270326 GTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCCTTTGCCTCTATCTTCTGG 270385
Query 42768 CTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826
|| ||| || ||| | |||||| || || || ||||| ||||| || ||| | ||
Sbjct 270386 CTGAAGAAGCGTGGTCT-GATGCCTGGTCTGACTTTCTCCAACGAGCTTATCTCTCGTGA 270444
Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC 42886
||||| || || | ||||| ||||| || || ||||| |||||||| || ||
Sbjct 270445 TGAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTTCTC---CCACCTCAACAACCGCCC 270501
Query 42887 CTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT 42946
||| || || || |||||| ||||| || | |||||| ||||||||||
Sbjct 270502 CTCCCCCAAGGTTGTTGAGGACATCATTGTCGAGGCTGTCGGCATCGAGCAGGAGTTCCT 270561
Query 42947 CACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACA 43005
|| | | || ||| ||| | ||| | ||||||||| | | ||||||||| | ||||
Sbjct 270562 GACTGATGCCCTTCCCTGTG-CTCTGCTTGGCATGAACGCCAAGCTCATGTGCCAATACA 270620
Query 43006 TCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACA 43059
|| ||| |||||| |||| |||||| | | | |||| || || || ||
Sbjct 270621 TCGAGTTCGTCGCTGACCGTCTCCT------GGTCGCTCTCGGCAACCAGAAGTACTTCA 270674
Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119
| | | |||||||||||| |||||| ||||| ||| |||||||||||||| |
Sbjct 270675 ATGCCACCAACCCCTTCGACTTCATGGAGTCTATCTCTCTGGCTGGCAAGACCAACTTCT 270734
Query 43120 TCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||||| |||| |||||||||
Sbjct 270735 TCGAGAAGCGTGTCGGTGACTACCAG 270760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336508633280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |