Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=4666273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || || ||||| ||||| ||| ||||||||| ||||||||||| | Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || | || ||||| ||||| || || || ||||| |||||||| ||| || Sbjct 4323923 AGAGTG-CGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGG 4323865 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||| |||||| ||| || ||| | | | |||| | ||| ||| Sbjct 4323864 GATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGAC 4323805 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || || || || || || || || ||||||||||| Sbjct 4323804 TTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061296662856