Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq12 183 4e-41
seq2 107 2e-18
seq15 87.8 2e-12
>seq12
Length=996256
Score = 183 bits (202), Expect = 4e-41
Identities = 560/855 (65%), Gaps = 23/855 (3%)
Strand=Plus/Minus
Query 114476 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 114535
|| |||| || || |||| | |||||| || ||||||| || || || || ||
Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152
Query 114536 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 114595
| || || || |||||| |||| |||||| || || ||| ||| || ||||||
Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092
Query 114596 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 114654
|||||||||||| | || | || ||||| || || | || ||| || || | ||| | |
Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032
Query 114655 ATCGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 114711
|| | | || | | || || | | || ||||||| ||||||||| ||| ||
Sbjct 677031 TTCTGAGCCTTGAA----GGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAG 676976
Query 114712 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 114771
|| |||||||| || || | | || | || || || |||| | |||||||| ||
Sbjct 676975 AGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAG 676916
Query 114772 AGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGA 114831
|| ||| | ||| ||||||||||||||||||| || || ||| |||| ||||| |
Sbjct 676915 AGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAA 676856
Query 114832 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 114891
||||||||| ||| ||| | || || | || || || |||| ||||| || ||
Sbjct 676855 GAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTC 676796
Query 114892 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACG 114945
| | || |||||||| || || ||||| | || | | || | ||| | |
Sbjct 676795 GAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTT--GTTG 676738
Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| |||||| ||||| | || ||| || || || || ||||| |||| ||||||
Sbjct 676737 -CCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACC 676679
Query 115006 ATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATG 115063
| || || || || || | || || ||| | | | || | || |||| |
Sbjct 676678 GTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCC--AGTAGCACGGATGCGGTGGACG 676621
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
| || |||||||| || || ||| || || || || | | ||| || | |||
Sbjct 676620 TTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAG 676561
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || || || ||| |||| | | | |||||||| | || ||| ||
Sbjct 676560 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAA 676501
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 115242
|| ||||| |||||||| || || || | |||||| |||| | || | |||||||||
Sbjct 676500 GGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAA 676442
Query 115243 ATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302
| ||||||||| | | | || || || ||||| ||||| | | || |||||
Sbjct 676441 GTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCAT 676382
Query 115303 AAACATGTATTgggg 115317
|||| || |||||
Sbjct 676381 CAACAGGTGCTGGGG 676367
>seq2
Length=2385438
Score = 107 bits (118), Expect = 2e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
|||||||||||| ||||| ||||| || || || ||||| ||| || ||||| |||||
Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||||| |||||| || | ||| || || ||||||||||| ||||| ||
Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| || |||| ||||||| || ||||
Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309
>seq15
Length=830467
Score = 87.8 bits (96), Expect = 2e-12
Identities = 190/281 (68%), Gaps = 4/281 (1%)
Strand=Plus/Minus
Query 10957 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAAC 11016
|||||| | || ||||||||||||||||||| || || || || | |||||||
Sbjct 102961 CTTACCAATTGCATCAATTTCATCGATGAAAATAATGCATGGCGTGTTCTTACGGGCATT 102902
Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG- 11075
|||| | || ||||| | | | ||| ||||| ||||||||||| || || | ||
Sbjct 102901 GGCAAACAGGTCGCGGACACGCGATGGACCAACACCGACAAACATTTCGACGAACTCGGA 102842
Query 11076 -CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGG 11134
| | | ||| || | ||| || || ||||||||| ||| | || || || | |
Sbjct 102841 ACCACTG-ACACTGTA-GAAAGGAACACCGGATTCACCAGCGGTAGCCTTAGCAAGCAAG 102784
Query 11135 GTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTT 11194
||||| || || || || || | ||||| |||||| || || ||| | |||||| |
Sbjct 102783 GTCTTACCAGTACCGGGAGGACCAGAGAGAATGGCACCGCGAGGAATCTTAGCACCAAGT 102724
Query 11195 CCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTC 11235
| | | ||||| || || | |||||| |||| |||
Sbjct 102723 CTCTGGAACCGCTCTGGCTGCTGGAGGAAGCTGACGAATTC 102683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597351897542240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |