Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq12 183 4e-41 seq2 107 2e-18 seq15 87.8 2e-12 >seq12 Length=996256 Score = 183 bits (202), Expect = 4e-41 Identities = 560/855 (65%), Gaps = 23/855 (3%) Strand=Plus/Minus Query 114476 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 114535 || |||| || || |||| | |||||| || ||||||| || || || || || Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152 Query 114536 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 114595 | || || || |||||| |||| |||||| || || ||| ||| || |||||| Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092 Query 114596 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 114654 |||||||||||| | || | || ||||| || || | || ||| || || | ||| | | Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032 Query 114655 ATCGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 114711 || | | || | | || || | | || ||||||| ||||||||| ||| || Sbjct 677031 TTCTGAGCCTTGAA----GGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAG 676976 Query 114712 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 114771 || |||||||| || || | | || | || || || |||| | |||||||| || Sbjct 676975 AGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAG 676916 Query 114772 AGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGA 114831 || ||| | ||| ||||||||||||||||||| || || ||| |||| ||||| | Sbjct 676915 AGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAA 676856 Query 114832 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 114891 ||||||||| ||| ||| | || || | || || || |||| ||||| || || Sbjct 676855 GAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTC 676796 Query 114892 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACG 114945 | | || |||||||| || || ||||| | || | | || | ||| | | Sbjct 676795 GAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTT--GTTG 676738 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| |||||| ||||| | || ||| || || || || ||||| |||| |||||| Sbjct 676737 -CCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACC 676679 Query 115006 ATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || || || || || | || || ||| | | | || | || |||| | Sbjct 676678 GTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCC--AGTAGCACGGATGCGGTGGACG 676621 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 | || |||||||| || || ||| || || || || | | ||| || | ||| Sbjct 676620 TTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAG 676561 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || || || ||| |||| | | | |||||||| | || ||| || Sbjct 676560 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAA 676501 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 115242 || ||||| |||||||| || || || | |||||| |||| | || | ||||||||| Sbjct 676500 GGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAA 676442 Query 115243 ATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||||||||| | | | || || || ||||| ||||| | | || ||||| Sbjct 676441 GTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCAT 676382 Query 115303 AAACATGTATTgggg 115317 |||| || ||||| Sbjct 676381 CAACAGGTGCTGGGG 676367 >seq2 Length=2385438 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| ||||| ||||| || || || ||||| ||| || ||||| ||||| Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| || | ||| || || ||||||||||| ||||| || Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || || |||| ||||||| || |||| Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309 >seq15 Length=830467 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/281 (68%), Gaps = 4/281 (1%) Strand=Plus/Minus Query 10957 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAAC 11016 |||||| | || ||||||||||||||||||| || || || || | ||||||| Sbjct 102961 CTTACCAATTGCATCAATTTCATCGATGAAAATAATGCATGGCGTGTTCTTACGGGCATT 102902 Query 11017 TTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG- 11075 |||| | || ||||| | | | ||| ||||| ||||||||||| || || | || Sbjct 102901 GGCAAACAGGTCGCGGACACGCGATGGACCAACACCGACAAACATTTCGACGAACTCGGA 102842 Query 11076 -CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGG 11134 | | | ||| || | ||| || || ||||||||| ||| | || || || | | Sbjct 102841 ACCACTG-ACACTGTA-GAAAGGAACACCGGATTCACCAGCGGTAGCCTTAGCAAGCAAG 102784 Query 11135 GTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTT 11194 ||||| || || || || || | ||||| |||||| || || ||| | |||||| | Sbjct 102783 GTCTTACCAGTACCGGGAGGACCAGAGAGAATGGCACCGCGAGGAATCTTAGCACCAAGT 102724 Query 11195 CCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTC 11235 | | | ||||| || || | |||||| |||| ||| Sbjct 102723 CTCTGGAACCGCTCTGGCTGCTGGAGGAAGCTGACGAATTC 102683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351897542240