Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 2e-19
seq10 91.5 2e-13
>seq1
Length=4666273
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| |||||||| | || ||||| || || ||||| || | ||||| || |
Sbjct 4323389 ACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACC 4323330
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || ||||||||||||||||| ||||| ||||||||||| | || | | ||||||
Sbjct 4323329 GTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTT 4323270
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| || || | | | | |||||| || || || || | |||||
Sbjct 4323269 GTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGAT 4323210
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| ||||| || || ||||| || ||||| |||||
Sbjct 4323209 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 96.9 bits (106), Expect = 4e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| |||||||| | || ||||| || || ||||| || | ||||| || |
Sbjct 4323617 ACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACC 4323558
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || ||||||||||||||||| ||||| ||||||||||| | || | | ||||||
Sbjct 4323557 GTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTT 4323498
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
||| ||| || |||| ||| | | | || || || ||||| || | || |
Sbjct 4323497 GTCTTGGATCTTGCTCTTGA-CGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAA 4323439
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || || || || ||||| || ||||| |||||
Sbjct 4323438 TAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 96.9 bits (106), Expect = 4e-15
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || |||||||| | ||||| || | || || | |||||| ||||||||
Sbjct 4323948 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAA 4323889
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135
|| || ||||||||||| | || | | |||||||||| ||| | || | |||| ||
Sbjct 4323888 GATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC-TGAATCTTGCTCTTGA-CG 4323831
Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | | | || ||| || || || || | ||||| || ||||| || || |||||
Sbjct 4323830 TTGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTG 4323771
Query 42195 ACAAAGATTTGCAT 42208
|| |||||||||||
Sbjct 4323770 ACGAAGATTTGCAT 4323757
>seq10
Length=1051362
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || |||||| || | || || |||||||| || ||||| |
Sbjct 358835 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 358776
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| || || ||||| || | || | || |||||||||| ||| || |||| ||| |
Sbjct 358775 TCAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 358717
Query 42139 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| ||
Sbjct 358716 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 358657
Query 42198 AA 42199
||
Sbjct 358656 AA 358655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211251843520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |