Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=4666273 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || | ||||| || ||||| || || |||||||| || | Sbjct 4323401 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323342 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| ||||||||||| || || | ||||| ||||||||||| || || Sbjct 4323341 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323282 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | || || Sbjct 4323281 GATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAAC 4323222 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | || || ||||| || ||||| Sbjct 4323221 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || | ||||| || ||||| || || |||||||| || | Sbjct 4323629 ACCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 4323570 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| ||||||||||| || || | ||||| ||||||||||| || || Sbjct 4323569 GAGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 4323510 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| || || | |||||| || ||||| Sbjct 4323509 GATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCAC 4323450 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | || || ||||| || ||||| Sbjct 4323449 CTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| | || || || |||| || || || || || ||||||||||| | | Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | || || | |||||| || || | || || ||||||||||| ||||| Sbjct 4323923 AGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323864 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | ||||| | || ||| Sbjct 4323863 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTATCGGAAGACTCGACT 4323804 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||| || | ||| || ||||| |||||||| Sbjct 4323803 TCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757 Score = 82.4 bits (90), Expect = 8e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||| || | || || |||||||||||| Sbjct 4323142 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCG 4323083 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| ||||| || || || || || || || || ||| Sbjct 4323082 GCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGACTTG 4323023 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421 ||| || | || ||| || || || || | || | ||||||||| |||| Sbjct 4323022 ACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTCA 4322968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643376012320