Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 9e-23
seq1 107 2e-18
seq10 96.9 3e-15
>seq2
Length=2385438
Score = 122 bits (134), Expect = 9e-23
Identities = 343/525 (65%), Gaps = 29/525 (6%)
Strand=Plus/Plus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383
|| || ||| |||| |||||| | ||||| || |||||| || |||| |
Sbjct 270248 GTTCCCTGCATTCGTCGCAAGGCTGACTGGGCCATCCGCTGGATCCAG---GACAAGGAG 270304
Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
|||| | ||| |||| |||| ||||| ||| || ||||| | || || || |||
Sbjct 270305 TCCACCTTCGCCCAGCGTCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGC 270364
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
||||||| | ||||| | | || | | || | ||||| || ||||| ||| |
Sbjct 270365 TCCTTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTGACTTTCTCC 270424
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT---------C 52553
|||||| | || || || || || || || ||||| ||||| || || || |
Sbjct 270425 AACGAGCTTATCTCTCGTGATGAGGGTCTCCACACCGACTTCGCCTGTCTGCTTTTCTCC 270484
Query 52554 TACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613
|| ||| | ||| || || | | | ||||| || |||
Sbjct 270485 CACCTCAACAACCGCCCCTCCCCCAAGGTTGTTGAGGACATCAT--------TGTC---- 270532
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
||||| || | ||||| ||||||| | || | || || || | ||||| |||
Sbjct 270533 GAGGCTGTCGGCATCGAGCAGGAGTTCCTGACTGATGCCCTTCCCTGTGCTCTGCTTGGC 270592
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||||| || ||||||| | ||||||||||| || || || ||||| ||||
Sbjct 270593 ATGAACGCCAAGCTCATGTGCCAATACATCGAGTTCGTCGCTGACCGTCTCCTGGTCGCT 270652
Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792
||| |||| ||| ||||||||||| || ||| || || || || ||| | || ||
Sbjct 270653 CTC-GGCAACCAGAAGTACTTCAATGCCACCAACCCCTTCGACTTCATGGAGTCTATCTC 270711
Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| | |||||||||||||| ||||||||||| ||||| || ||
Sbjct 270712 TCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 270756
>seq1
Length=4666273
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| || ||||| | | || ||||| || ||||||||||||
Sbjct 4323400 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323341
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || |||||| || || ||||| | |||| |||||||| |||||||| ||
Sbjct 4323340 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323281
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| ||| || || | |||| || | |||||||| ||||| ||
Sbjct 4323280 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTG-TCGATGGTGTCGGAAGACTCAAC 4323222
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || || || || || || || ||||||||
Sbjct 4323221 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| || ||||| | | || ||||| || ||||||||||||
Sbjct 4323628 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323569
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || |||||| || || ||||| | |||| |||||||| |||||||| ||
Sbjct 4323568 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323509
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | || || | |||||||||
Sbjct 4323508 ATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATAGTATCAGAGGACTCCACC 4323449
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || ||||| || || || || || ||||||||
Sbjct 4323448 TCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
>seq10
Length=1051362
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||| || |||||||| || || |||| |||
Sbjct 358835 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 358776
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| ||||| || || ||||| || || || || ||||| || | || || || | |||
Sbjct 358775 TCAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 358717
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 358716 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 358658
Query 138603 AAAA 138606
|||
Sbjct 358657 GAAA 358654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260985652160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |