Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 4e-21
seq10 104 2e-17
>seq1
Length=4666273
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||| || | || ||||| || || || ||||||||
Sbjct 4323983 CCACCGCGCAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAG 4323924
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || | ||| ||||||||| |||||| |||||||| || |||||
Sbjct 4323923 AGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323864
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| || || ||||| |||| |||| ||| || | | ||||||
Sbjct 4323863 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG-TCGATGGTATCGGAAGACTCGAC 4323805
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | || ||||| || ||||| || || || || |||||
Sbjct 4323804 TTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 4323757
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||||| | ||||| || || || || ||||| |||
Sbjct 4323400 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323341
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || |||||| |||| | |||||||| || || ||
Sbjct 4323340 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323281
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||| | | |||| |||||| | | ||| ||
Sbjct 4323280 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACC 4323221
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || |||||||| || || || || || ||||||||
Sbjct 4323220 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||||| | ||||| || || || || ||||| |||
Sbjct 4323628 CCACCACGCAGACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 4323569
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || |||||| |||| | |||||||| || || ||
Sbjct 4323568 AGAGTGCGACCGTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 4323509
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||||||||| ||| || ||||| |||| |||| || || | ||| ||
Sbjct 4323508 ATACCCTCCTTGTCTTGGATCTTGCTCTTGACGTTG-TCGATAGTATCAGAGGACTCCAC 4323450
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || || || || || || || ||||||||
Sbjct 4323449 CTCCAGGGTAATAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || ||||| || || || ||||| ||
Sbjct 4323172 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 4323113
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || || ||| |||||| |||||||| || |||||
Sbjct 4323112 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 4323053
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||||| | |||| |||||| | ||| ||
Sbjct 4323052 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACATTGTCGATGGTGTCAGAGGACTCAACC 4322993
Query 127067 TCGACGGTCACCGTTTTGCCGGTCA 127091
|| | ||| | || ||||| ||||
Sbjct 4322992 TCCAAGGTGATGGTCTTGCCAGTCA 4322968
>seq10
Length=1051362
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| || || ||| |||||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| || |||||||| || || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 358715
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 358714 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 358655
Query 127105 A 127105
|
Sbjct 358654 A 358654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499444822720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |