Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq12 163 3e-35 seq2 125 9e-24 >seq12 Length=996256 Score = 163 bits (180), Expect = 3e-35 Identities = 552/852 (65%), Gaps = 17/852 (2%) Strand=Plus/Minus Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496 || |||| || || |||| | |||||| || ||||||| || || || || || Sbjct 677211 GAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAA 677152 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | || || || |||||| |||| |||||| || || ||| ||| || |||||| Sbjct 677151 AGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 677092 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-C 116615 ||||| ||||| | || | || ||||| || || | || ||| || || | ||| | | Sbjct 677091 TTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCACAGC 677032 Query 116616 ATCGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 || | | || | | || || | | || ||||||| ||||||||| ||| || Sbjct 677031 TTCTGAGCCTTGAA----GGTCTTACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAG 676976 Query 116673 GGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732 || |||||||| || || | || | || || || |||| | || ||||| || Sbjct 676975 AGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAG 676916 Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 || ||| | ||| ||||||| ||||||||||| || || ||| |||| || || | Sbjct 676915 AGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAA 676856 Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 116852 ||||||||| ||| ||| | || || | || || || |||| ||||| || || Sbjct 676855 GAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAGAACTC 676796 Query 116853 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACC 116909 | | || |||||||| || || ||||| | || | | || ||| || Sbjct 676795 GAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCC 676736 Query 116910 AGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATC 116969 | |||||| ||||| | || || ||| || || || ||||| |||| |||||| | Sbjct 676735 ACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTT 676676 Query 116970 AGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGC 117027 || || || || || | || || ||| | | || | || ||||| || | Sbjct 676675 GGAGGAACCGTTGGTACCGCCAATGTAGGAGCC--AGTAGCACGGATGCGGTGGACGTTC 676618 Query 117028 ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATC 117087 | |||||||| || || ||| || || || || | | ||| || | ||||| Sbjct 676617 AAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGAGTGTCATAGATA 676558 Query 117088 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGT 117147 || || || ||| |||| | | | |||||||| | || ||| || || Sbjct 676557 CCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGA 676498 Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATC 117206 ||||| |||||||| || || || | |||||| |||| | || | ||||||||| | Sbjct 676497 GTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-ACTTCTGGGACATCAAGTG 676439 Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266 ||||||||| | | | || || || ||||| ||||| | || || ||||| || Sbjct 676438 GTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATCAA 676379 Query 117267 CATGTATTGGGG 117278 || || ||||| Sbjct 676378 CAGGTGCTGGGG 676367 >seq2 Length=2385438 Score = 125 bits (138), Expect = 9e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||||||||| ||||| ||||| || || || ||||| |||||| ||||| ||||| Sbjct 270457 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACC 270398 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| || | ||| ||||||||||||||||| ||||| || Sbjct 270397 ACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGC 270338 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || || |||| ||||||| ||| |||| Sbjct 270337 GGCAAAGGCAACCAGACGCTGGGCGAAGG 270309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505451504480