Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 2e-21
seq12 113 7e-20
>seq2
Length=2385438
Score = 118 bits (130), Expect = 2e-21
Identities = 317/483 (66%), Gaps = 9/483 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| ||| || || || |||||||| |||| |||||
Sbjct 270742 CTTCTCGAAGAAGTTGGTCTTGCCAGCCAGAGAGATAGACTCCATGAAGTCGAAGGGGTT 270683
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| | | || |||| | |||||||| |||| | | ||| || || || ||
Sbjct 270682 GGTGGCATTGAAGTACTTCTGGTTGCCGAGAGCGACCAGGAGACGGTCAGCGACGAACTC 270623
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| ||| ||| || || ||||| | ||| || || || |
Sbjct 270622 GATGTATTGGCACATGAGCTTGGCGTTCATGCCAAGCAGAGCACAGGGAAGGGCATCAGT 270563
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTACC 159887
||| ||||||| ||| || |||| || ||| | || | | || || || |
Sbjct 270562 CAGGAACTCCTGCTCGATGCCGACAGCCTCGACAATGATGTCCTCAACAACCTTGGGGGA 270503
Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
||| ||| || ||| || || || || || |||||| ||| || ||
Sbjct 270502 GGGGCGGTTG------TTGAGGTGGGAGAAAAGCAGACAGGCGAAGTCGGTGTGGAGACC 270449
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
||| || |||||||| | ||||||||| | | || || ||||| | |||||| ||
Sbjct 270448 CTCATCACGAGAGATAAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGACCACGCTTCTT 270389
Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
||||| || || | ||||| | || || ||||| ||||| ||||| ||||| ||
Sbjct 270388 CAGCCAGAAGATAGAGGCAAAGGAGCCAGAGAAGAAGATACCCTCAACGGCGGCAAAGGC 270329
Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125
|| || | || | || | || | |||| ||| |||| | ||||||| |||||
Sbjct 270328 AACCAGACGCTGGGCGAAGGTGGACTCCTTGTCCTGGATCCAGCGGATGGCCCAGTCAGC 270269
Query 160126 CTT 160128
|||
Sbjct 270268 CTT 270266
>seq12
Length=996256
Score = 113 bits (124), Expect = 7e-20
Identities = 546/856 (64%), Gaps = 22/856 (3%)
Strand=Plus/Minus
Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982
|||| | || |||||| ||||||||| || | |||||||| | |||||| || |
Sbjct 677130 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTA 677071
Query 204983 CCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTT 205041
|| |||| |||||| ||| || ||| ||||| | |||||| | |||
Sbjct 677070 CCAGTCTCAGTCTGAGCCTCG-AGGATGGCATACCACAGCTTCTGAGCCTTGAAGGTCTT 677012
Query 205042 -----CACGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCG 205096
|||| | ||| | |||||| || |||||| || |||| || |||
Sbjct 677011 ACGGCCACGGCCCTCCTT-----CTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCG 676957
Query 205097 TACACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCA--CATCTGATCGT 205154
|| ||||| || || || | ||||| || | ||||| ||| || | | |
Sbjct 676956 TAGACGTCGGCAAGACCAGGGGCCTCGTTGGGGCAGAACAGAGTCCAGTCACCG--TTGG 676899
Query 205155 CTTTCACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCC 205214
| | || | || ||| ||||| || | ||||||| || | || |||||||| || |
Sbjct 676898 CCTCAACACGCTTCATGAACAGATCAGGGGTCCACAGAGCGAAGAAGAGATCACGAGCAC 676839
Query 205215 TAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGC 205273
|| | || | || ||||||| || ||||| || || | | ||||||||||
Sbjct 676838 GAACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCCAAG-AACTCGAACACGTCGGCGTGC 676780
Query 205274 CACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATG 205333
|| ||||| | | | ||| | || || || | |||||| ||||||||||| || |
Sbjct 676779 CAGGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAG 676720
Query 205334 CGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTG 205393
|||| | |||||| || |||||||| || || | |||||||| || ||||| ||
Sbjct 676719 CGAGCGGTGTTGTTGAACACACGCAGCATAGGAACGATACCGTTGGAGGAACCGTTGGTA 676660
Query 205394 CTGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAA 205453
| | ||| ||||| ||| | | | | || | | |||||| || ||||
Sbjct 676659 CCGCCAATGTAGGAGCCAGTAGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCG 676600
Query 205454 CACTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTC 205512
||||| ||| ||| || |||| ||||||| ||||| || | ||| || ||
Sbjct 676599 GTCTTGGAAATCATGGCACAGGTCTT-CAGAGTGTCATAGATACCCTCAATGCTGTCCTC 676541
Query 205513 CGCCAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGA 205571
| || | || ||||| |||| ||||||| | || | | || || |||| ||| |
Sbjct 676540 CTTCA-TATCAACCAGGAAGCAAGAAGCCAATTGGGGAGAAGGAGTACCGGCGTTGAACA 676482
Query 205572 GCGTGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGC 205631
| |||||| |||||| ||||| ||||| | || | ||||||||| | |
Sbjct 676481 GTGTGGGGGAAGCGTGGGTGAAGAACTTCTGGGACATCAAGTGGTAGGTCTCAATGGCCT 676422
Query 205632 TCTCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCT 205691
| || | ||| ||||| ||||| | || | | ||| || ||||| || || | ||
Sbjct 676421 TTTCGATATCCTCACCGTGGATACCAACTGCAACACGCATCAACAGGTGCTGGGGACGCT 676362
Query 205692 CCATCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAA 205751
| ||| | |||| | |||||| || | | ||| ||||| || |||| |
Sbjct 676361 CAGCAACCTTACCGTTGATGCGGAGCAGGTATGAACGCTCGAGGGTCTTGAAACCAAAGA 676302
Query 205752 AGTTGAAGGTGTAGTC 205767
||||| || | ||||
Sbjct 676301 AGTTGTAGTTAAAGTC 676286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795152933807680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |