Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq10 127 2e-24 seq1 120 3e-22 >seq10 Length=1051362 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| |||||||| | || |||||||||||||||||||| | Sbjct 358835 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 358776 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| || ||||| || | || | || |||||||||| |||||| |||||| ||| | Sbjct 358775 TCAGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 358717 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 358716 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 358657 Query 46583 AA 46584 || Sbjct 358656 AA 358655 >seq1 Length=4666273 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||| ||| | ||| ||||| ||||| ||||||||||| |||||||| | Sbjct 4323389 ACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACC 4323330 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| || ||||| || | ||||||||||| | || | | |||||| Sbjct 4323329 GTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTT 4323270 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||| | | | | |||||| || || || || | ||||| Sbjct 4323269 GTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGAT 4323210 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || ||||| ||||| Sbjct 4323209 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4323174 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||| ||| | ||| ||||| ||||| ||||||||||| |||||||| | Sbjct 4323617 ACGCAGGACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACC 4323558 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| || ||||| || | ||||||||||| | || | | |||||| Sbjct 4323557 GTCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTT 4323498 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| |||||| |||||| ||| | | | || || || ||||| |||| || | Sbjct 4323497 GTCTTGGATCTTGCTCTTGA-CGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAA 4323439 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || || || || || || ||||| ||||| Sbjct 4323438 TAGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 4323402 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || || | |||||| || ||||| Sbjct 4323948 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCGAA 4323889 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | |||||||||| ||||| |||||| ||| Sbjct 4323888 GATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGT 4323830 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || |||| ||||| || ||||| || || || || | Sbjct 4323829 TGTCGATGGTATCGGAAGACTCGACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTGA 4323770 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 4323769 CGAAGATTTGCAT 4323757 Score = 109 bits (120), Expect = 6e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || | || || ||||||||||||||||| Sbjct 4323137 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAA 4323078 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 4323077 GATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGACTTGACATT 4323018 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | ||||| || || || |||| |||||||| ||||| |||| Sbjct 4323017 GTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTCA 4322968 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || |||||||| | || ||||||||||| || ||||| Sbjct 3064431 CTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 3064490 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 3064491 GATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 3064529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236789070560