Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 154 1e-32 seq1 140 3e-28 seq10 113 5e-20 >seq2 Length=2385438 Score = 154 bits (170), Expect = 1e-32 Identities = 200/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || ||||| || || | |||||||| | ||||||||| ||| || || Sbjct 270136 GTAGGTATCAATGAGCAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 270077 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||||| || |||||| ||||| || ||| | ||||||||| | || || Sbjct 270076 ACCGTAGAAGCAGCGGGCCTCGGGGACCTGAACCTCTCCACTGAAACGCTCAAGCAAGTT 270017 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| || || ||| ||||||||| || || || ||||| || || | || Sbjct 270016 CTCGTTGACAATACCATCGGAGGCGGCGAAGAAAGCAAGGACGTGGGAGACAAAGTAACG 269957 Query 133347 CTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | |||||||| ||| | ||||||| | ||||||||||| || | |||||| Sbjct 269956 CTCATCGTCGTTCATGCGGTTGTGCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTC 269897 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| || || |||||||| || |||||||| Sbjct 269896 TGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 269861 >seq1 Length=4666273 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || || ||| | || Sbjct 4323174 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCC 4323233 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 4323234 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 4323293 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||||| || |||| ||||| ||| |||||||||| Sbjct 4323294 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323353 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || |||||||| |||||| || | || || Sbjct 4323354 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGG 4323400 Score = 129 bits (142), Expect = 6e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || || ||| | || || ||| || | Sbjct 4323402 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCT 4323461 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | |||| | |||| || |||| ||||| ||||| || ||| | |||| Sbjct 4323462 GATACTATCGACAACG--TCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACC 4323519 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||||| || |||| ||||| ||| |||||||| Sbjct 4323520 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACA 4323579 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| |||||| | || || |||||||| |||||| || | || || Sbjct 4323580 ACATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGG 4323628 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| | || |||||| | || Sbjct 4323757 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCC 4323816 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | |||| || || | ||||| ||||| || || | |||| Sbjct 4323817 GATACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACC 4323874 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || ||| |||| || | ||||| ||| || |||| Sbjct 4323875 AGCAGCGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACA 4323934 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| | || || || |||| || ||| || | || |||| Sbjct 4323935 ACATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTGCGCGGTGGCC 4323985 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| | || || ||| || | |||| | | | | | || Sbjct 4322970 ACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCTGACACCATCGACAATGTCAAGTCT 4323029 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| || || | ||||| ||||| || || | ||| ||||| Sbjct 4323030 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAG 4323089 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 |||||||| || | || |||||| |||||||||||||| ||||| | || || || Sbjct 4323090 CAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCCACTCTCCAC 4323149 Query 38448 TTGGTGCTGCGT 38459 ||||| || ||| Sbjct 4323150 TTGGTCCTCCGT 4323161 >seq10 Length=1051362 Score = 113 bits (124), Expect = 5e-20 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 358655 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 358714 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| |||||| | || || || || | Sbjct 358715 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAACGTC 358772 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | ||||| || | ||||||||||||||| | Sbjct 358773 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGA 358832 Query 38431 AGG 38433 ||| Sbjct 358833 AGG 358835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171374507520