Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 1e-32
seq1 140 3e-28
seq10 113 5e-20
>seq2
Length=2385438
Score = 154 bits (170), Expect = 1e-32
Identities = 200/276 (72%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| || ||||| || || | |||||||| | ||||||||| ||| || ||
Sbjct 270136 GTAGGTATCAATGAGCAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 270077
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||| ||||| || |||||| ||||| || ||| | ||||||||| | || ||
Sbjct 270076 ACCGTAGAAGCAGCGGGCCTCGGGGACCTGAACCTCTCCACTGAAACGCTCAAGCAAGTT 270017
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||| || || ||| ||||||||| || || || ||||| || || | ||
Sbjct 270016 CTCGTTGACAATACCATCGGAGGCGGCGAAGAAAGCAAGGACGTGGGAGACAAAGTAACG 269957
Query 133347 CTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | |||||||| ||| | ||||||| | ||||||||||| || | ||||||
Sbjct 269956 CTCATCGTCGTTCATGCGGTTGTGCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCTC 269897
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| || || |||||||| || ||||||||
Sbjct 269896 TGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 269861
>seq1
Length=4666273
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| |||||||| | || || ||| | ||
Sbjct 4323174 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCC 4323233
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| || ||| | |||||
Sbjct 4323234 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 4323293
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| || || ||||| || |||| ||||| ||| ||||||||||
Sbjct 4323294 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 4323353
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| |||||| | || || |||||||| |||||| || | || ||
Sbjct 4323354 ATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGG 4323400
Score = 129 bits (142), Expect = 6e-25
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || || || ||| | || || ||| || |
Sbjct 4323402 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACTATTACCCTGGAGGTGGAGTCCTCT 4323461
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | |||| | |||| || |||| ||||| ||||| || ||| | ||||
Sbjct 4323462 GATACTATCGACAACG--TCAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCGGACC 4323519
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| || || ||||| || |||| ||||| ||| ||||||||
Sbjct 4323520 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACA 4323579
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| |||||| | || || |||||||| |||||| || | || ||
Sbjct 4323580 ACATCCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTCTGCGTGGTGG 4323628
Score = 100 bits (110), Expect = 3e-16
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| | || |||||| | ||
Sbjct 4323757 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTCGAGTCTTCC 4323816
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| | |||| || || | ||||| ||||| || || | ||||
Sbjct 4323817 GATACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCGGACC 4323874
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| || || ||| |||| || | ||||| ||| || ||||
Sbjct 4323875 AGCAGCGTCTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACA 4323934
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||| ||||| | || || || |||| || ||| || | || ||||
Sbjct 4323935 ACATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTGCGCGGTGGCC 4323985
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327
|| ||||| ||||||||| | || || ||| || | |||| | | | | | ||
Sbjct 4322970 ACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCTGACACCATCGACAATGTCAAGTCT 4323029
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| ||||| || || | ||||| ||||| || || | ||| |||||
Sbjct 4323030 AAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTGATCTTCGCCGGCAAG 4323089
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
|||||||| || | || |||||| |||||||||||||| ||||| | || || ||
Sbjct 4323090 CAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCCACTCTCCAC 4323149
Query 38448 TTGGTGCTGCGT 38459
||||| || |||
Sbjct 4323150 TTGGTCCTCCGT 4323161
>seq10
Length=1051362
Score = 113 bits (124), Expect = 5e-20
Identities = 137/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | |
Sbjct 358655 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 358714
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| ||||| ||||| |||||| | || || || || |
Sbjct 358715 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAACGTC 358772
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | ||||| || | ||||||||||||||| |
Sbjct 358773 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGA 358832
Query 38431 AGG 38433
|||
Sbjct 358833 AGG 358835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171374507520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |