Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 387 2e-102 seq2 165 1e-35 seq12 118 1e-21 >seq1 Length=4666273 Score = 387 bits (428), Expect = 2e-102 Identities = 770/1136 (68%), Gaps = 11/1136 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 4602374 TCACCGGACAGGATAGCGGCCTGGACGGCGGCACCGTAGGCAACAGCCTCATCGGGGTTG 4602315 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||| || | || || | | | || || || ||| Sbjct 4602314 ATGGACTTGTTGGGGTCCTT---GTTGAAGAAGTCGGAGACGAGCTTCTGGATCTTGGGG 4602258 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||||| ||||| || | || || || || ||||| | | Sbjct 4602257 ATACGGGTGGAACCACCGACCAGGACGATCTCGTGGACGGAGGACTTGTCAATCTTGGCG 4602198 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| ||||| | |||| || || ||| Sbjct 4602197 TCACGGAGGACACGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCAGAGCTCC 4602138 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || ||||| |||| || ||| | | || ||||| Sbjct 4602137 TCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATACCCTCGAAGAGAGAGTCAATC 4602078 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 4602077 TCGATGGAGGTCTGGGCAGCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCAGTGCGG 4602018 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| |||||||| | ||| || | || ||||| || || || || ||||| Sbjct 4602017 AGACGACGCAGGGCACGGGCGTTGGTGGTCAGGTCCTTCTTGTGCTTGCGCTTGAACTCG 4601958 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | || | ||||| || |||||||||||||| || || || Sbjct 4601957 TTGACGAAGTGGTTGACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACCA 4601898 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 || || | || || || |||||||| | |||||| | | | |||||||| || ||| Sbjct 4601897 GCAGTAGACTTAACCTCGAAGATACCCTCCTCAATGGTCAGGAGAGAAACATCGAAGGTA 4601838 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 ||||||||||| || || || || ||||| || | || | ||||| || |||||| Sbjct 4601837 CCACCACCCAGATCGAAGATCAGGACGTTGCGCTCACCCTCAGTCTTCTTGTCAAGACCG 4601778 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || || ||||| || || || || || || || ||||| ||| ||| || || ||||| Sbjct 4601777 TAGGCAATAGCGGCGGCAGTAGGCTCGTTGATGATACGGAGAACGTTGAGACCGGCAATC 4601718 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | || || || || || || || || || ||||| |||||||| ||||| || | | Sbjct 4601717 AGACCGGCGTCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAGGCGGGGACAGTGATG 4601658 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| |||| | |||||| || | || ||| | || ||| ||| || Sbjct 4601657 ACAGCGTTGTTGACAGTGCCACCGAGGTAAGCCTCAGCGGTCTCACGCATCTTGACGAGG 4601598 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| | |||| ||| || | | ||||| || | ||||| || || ||||| ||| Sbjct 4601597 ATCATGGCAGAAACCTCCTCGGGGGTGAACTGCTTAGCCTCACCCTTGAACTCAACCTCA 4601538 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || | ||| || | ||| || | ||| | | ||| | |||||||| | Sbjct 4601537 ATGACGGGCTT---GGTAGCCTTCTCAATGATCTTGAAAGGCCAGTGCTTCATATCAGCC 4601481 Query 7910 TGGACCTGTTGGTCC-GAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| |||| |||||| | ||||| |||||||| || || || || ||||| Sbjct 4601480 TGGACCTCGGCGTCCTGAAAAC-GACGACCGATCAGACGCTTGGCGTCGAAGACGGTGTT 4601422 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | ||||||||||| |||||||| || || || ||||||||||| || | || Sbjct 4601421 GTGAGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATAAGACGCTC---GGTGTC 4601365 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || ||| |||| ||||| || || || || |||||||| || || || || | Sbjct 4601364 GGTGAAGGCAACGAACGAGGGGGTGGTACGGTTACCCTGGTCGTTGGCGATGATCTCAAT 4601305 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 |||||| | | |||| || || || || || || || || ||||| ||||||| Sbjct 4601304 GCGGTCATCACGGAAGACACCCACACAGGAGTAGGTGGTACCCAAATCGATACCGA 4601249 >seq2 Length=2385438 Score = 165 bits (182), Expect = 1e-35 Identities = 351/519 (68%), Gaps = 9/519 (2%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| ||||||||||| |||||||| ||||| | | ||| || | || ||| | | || Sbjct 20724 CAGGTCCTCAAAACGGGCACGGGTGATGGAAGAGTTGAAGTCCTCACCATCGAAGAGAGA 20665 Query 7303 ATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||||| |||| ||| || | ||| ||| ||| | || ||||| || |||||||| Sbjct 20664 GTCAATCTCAACGGTGGTCTGAGTGGCGT--TAGAGAGGGTACGCTTGGCACGCTCACAA 20607 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || || || | ||| ||||| ||||| | | ||| |||| || || | || || Sbjct 20606 GCAGTACGCAGACGGCGAAGAGCACGGGCATCACCAGAAAGGTCCTTGCCAGTCTTGCGC 20547 Query 7421 TTAAACTCTTCAGAGAAG-TGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 | ||||| | |||| |||| || || | | |||||||||| |||||| | ||| Sbjct 20546 TGGAACTCCTTCTTGAAGAAGTCG-AGCAGGTTAGTGTCGAAATCTTGACCACCAAGGTG 20488 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 ||||| || || || || ||||| || | ||| || | ||||| | || || || Sbjct 20487 AGTATCACCAGCAGTAGCCTTGACGGTGAAAACACCACCCTGGATGTTGAGCAGGGAGAC 20428 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 ||| || |||||||||||||| || | || || ||||| || | || | || Sbjct 20427 ATCGAAGGTACCACCACCCAGATCGTAGATCAGGACGTTACGCTCCTTCTCGGTCTTGCC 20368 Query 7600 A---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 | | |||||||| || || || || || || || || || || ||||| ||| ||| Sbjct 20367 AGAGCCCAGACCGTAGGCAATGGCGGCGGCAGTAGGCTCGTTGATGATACGCAGAACGTT 20308 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 |||||| ||||| | | ||||| || || || || || || ||||| ||||| || Sbjct 20307 CAGGCCGGCAATGGCACCAGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAAGC 20248 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || | || || | | || ||||| ||||| Sbjct 20247 GGGCACAGTGATAACGGCCTTCTCAACCTTCTTGCCGAG 20209 >seq12 Length=996256 Score = 118 bits (130), Expect = 1e-21 Identities = 352/540 (65%), Gaps = 11/540 (2%) Strand=Plus/Minus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522 ||||| |||||||| ||| | |||||||| | ||||| ||||| | |||||| ||| Sbjct 676992 TCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCC 676933 Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582 | | || || |||| | ||| | ||| | || ||||| || |||||||||| ||| Sbjct 676932 TCGTTGGGGCAGAACAGAGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAACAGATCA 676873 Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642 || |||||| || | ||||| || ||| | |||| || | ||| || ||| Sbjct 676872 GGGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTG 676813 Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAG-A 105701 || | || | || |||| | ||||||||||| || || | |||| |||| | | Sbjct 676812 CGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCA 676753 Query 105702 CC------CTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCG 105755 || ||| | ||| | | || | |||||| | ||||| ||| |||| || Sbjct 676752 CCGGGGCGCTT---GTTGCCAC-CCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACG 676697 Query 105756 TAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGC 105815 | ||| |||| ||||| | ||| | || || || || | ||| | || | | || Sbjct 676696 CAGCATAGGAACGATACCGTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGC 676637 Query 105816 ACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTC 105875 ||| | ||| |||| || |||||||| ||||| ||| || ||||| Sbjct 676636 ACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGT 676577 Query 105876 TTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGA 105935 || | || || || ||||| || || || || ||||| | ||| |||||| || || Sbjct 676576 CTTCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGA 676517 Query 105936 TGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAA 105995 | || ||| || || ||||| || |||||||| || || | || || |||| || Sbjct 676516 AGCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGAA 676457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130989871520