Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq12 235 6e-57 seq15 134 2e-26 seq9 89.7 6e-13 seq3 89.7 6e-13 >seq12 Length=996256 Score = 235 bits (260), Expect = 6e-57 Identities = 576/860 (67%), Gaps = 25/860 (3%) Strand=Plus/Minus Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 |||| ||||| | || || | ||||| |||| ||| || | | |||| || | Sbjct 677225 TGGGCAGAGCCAGGGAGGCCAAGTTGCAAACAGCGACCTCATCAGGGGCACTGTACTCAA 677166 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 || || || || | |||||| || |||| ||||| ||||||||| || ||| Sbjct 677165 TGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGC 677106 Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458 |||||| |||||||| || |||||| | ||| ||||||| || ||||| | || ||| | Sbjct 677105 GGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCCTCGAGGA 677046 Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAG-TTGCGTTAGCGA-GACCTTCCTCCTCGT 110515 |||| | ||| | | || | | | | | || || || | | || |||| ||||| Sbjct 677045 TGGCATACCACAGCTTCTGAGCCTTGAAGGTCTTACG---GCCACGGCCCTCCTTCTCGT 676989 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575 |||| ||||| | ||||| |||| ||||| || || | |||||| |||| || Sbjct 676988 ACTTCTCGTACAGAGCATCAAACTCCTCGCCGTAGACGTCGGCAAGACCAGGGGCCTCGT 676929 Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAACAGGTCAG 110632 ||| ||||| || | ||| | |||| | ||||||| | |||||||||||| |||| Sbjct 676928 TGGGGCAGAACAGAGTCCAGT---CACCGTTGGCCTCAACACGCTTCATGAACAGATCAG 676872 Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692 | |||||| || |||| || ||||| |||| |||| || | ||| ||||| || Sbjct 676871 GGGTCCACAGAGCGAAGAAGAGATCACGAGCACGAACCTCCTCCTTACCGTGGTTCTTGC 676812 Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752 | || ||||| || || | | || | |||||| || || || |||| || | || | Sbjct 676811 GCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCAC 676752 Query 110753 C------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 | ||| | | || |||||| |||||||| || ||| ||||| || | | Sbjct 676751 CGGGGCGCTT--GTTG-CCACCCTGGTCGACATAGCGAGCGGTGTTGTTGAACACACGCA 676695 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCAC 110866 ||||||||| || || | ||| ||| || ||||| | ||| ||| | | |||| Sbjct 676694 GCATAGGAACGATACCGTTGGAGGAACCGTTGGTACCGCCAATGTAGGAGCCAGTAGCAC 676635 Query 110867 GAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCT 110925 | ||| ||||| | || ||||||||||| || ||| ||| ||||| ||| Sbjct 676634 GGATGCGGTGGACGTTCAAGCCAATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCT 676575 Query 110926 GTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAA 110985 | || || |||| ||||| ||||| || |||| | ||| || ||||||||| Sbjct 676574 -TCAGAGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAA 676516 Query 110986 GACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGA 111045 | || || ||| ||| || || || ||||| ||||| || | || || |||| | | Sbjct 676515 GCCAATTGGGGAGAAGGAGTACCGGCGTTGAACAGTGTGGGGGAAGCGTGGGTGAAGA-A 676457 Query 111046 CCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACC 111104 | | ||||||||| || ||| || || | || | ||| | |||||| ||||| Sbjct 676456 CTTCTGGGACATCAAGTGGTAGGTCTCAATGGCCTTTTCGATATCCTCACCGTGGATACC 676397 Query 111105 AATGGCAACTCGCATGAACA 111124 || ||||| ||||| |||| Sbjct 676396 AACTGCAACACGCATCAACA 676377 >seq15 Length=830467 Score = 134 bits (148), Expect = 2e-26 Identities = 337/506 (67%), Gaps = 21/506 (4%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || |||||||| || || || | || || | ||||||| ||| ||||| ||| || Sbjct 103134 CGGTCGAAACGGCCAGGACGCATCAGGGCCTTGTCAAGAACATCAGGTCGGTTGGTACCG 103075 Query 11563 GCAATGACTACAATGCCAG-TCT-CATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | || |||| || | || || ||| ||| ||||||||||| || || | ||||| Sbjct 103074 GCCAAAACGACAA--CCTGCTCGGCAGTGTTGAAGCCGTCCATTTCAGTAAGGATCTGGT 103017 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC-------TGCC--GAACGCT 11671 ||| || || |||||||||||| | ||||| ||| | || Sbjct 103016 TGAGAGTGCTCTCGCGCTCATCGTTGCCG------CCACCAAAGTTTTGCTTTGCCCGAG 102963 Query 11672 TCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731 |||||| | || ||||| ||||||||||| | || || || ||| ||| || | Sbjct 102962 ACTTACCAATTGCATCAATTTCATCGATGAAAATAATGCATGGCGTGTTCTTACGGGCAT 102903 Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791 | || || || || |||||| | |||||||| || ||||| || ||||| | | Sbjct 102902 TGGCAAACAGGTCGCGGACACGCGATGGACCAACACCGACAAACATTTCGACGAACTCGG 102843 Query 11792 CGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850 || |||||| | ||| |||||| || ||||||||| | || ||| || | Sbjct 102842 AACCACTGACACTGTA-GAAAGGAACACCGGATTCACCAGCGGTAGCCTTAGCAAGCAAG 102784 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTT 11910 |||||||| ||||| || | ||||| ||||| ||| || || || ||||| |||||| | Sbjct 102783 GTCTTACCAGTACCGGGAGGACCAGAGAGAATGGCACCGCGAGGAATCTTAGCACCAAGT 102724 Query 11911 CCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCG 11970 | | | ||||| |||| || ||||||| || | ||| || ||| | || || Sbjct 102723 CTCTGGAACCGCTCTGGCTGCTGGAGGAAGCTGACGAATTCCATAATTTCGACTTTAGCT 102664 Query 11971 GAGTCGATACCCTCAACATCGGTGAA 11996 ||| ||||| | ||||| | ||| Sbjct 102663 TCGTCCATACCGGCGACATCCGAGAA 102638 >seq9 Length=1174605 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 617250 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 617191 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 617190 TGGGACCA-CTTTT 617178 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 612341 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 612400 Query 136776 TGGGAACA 136783 ||||| || Sbjct 612401 TGGGACCA 612408 >seq3 Length=2224433 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 965828 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 965887 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 965888 TGGGACCA-CTTTT 965900 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 966710 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 966769 Query 136776 TGGGAACAGCTTTT 136789 ||||| || |||| Sbjct 966770 TGGGACCACGTTTT 966783 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 967747 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 967806 Query 136776 TGGGAACAGCTTTT 136789 ||||| || |||| Sbjct 967807 TGGGACCATTTTTT 967820 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 968182 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 968123 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 968122 TGGGACCA-CTTTT 968110 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| Sbjct 967074 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGAGGGTTCGACCCCCTC 967133 Query 136776 TGGGAACA 136783 ||||| || Sbjct 967134 TGGGACCA 967141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974321418400