Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 5e-24
seq10 113 1e-19
seq12 100 6e-16
>seq1
Length=4666273
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| || || || || || ||||| |||| ||||| | || || || ||||||
Sbjct 4323604 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGC 4323545
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| |||||||| || || || ||||| || || || || || |||||||| || ||
Sbjct 4323544 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTTGGATCTTG 4323485
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| || || || || || ||||| || ||||||| |||||||| ||
Sbjct 4323484 CTCTTGACGTTGTCGATAGTATCAGAGGACTCCACCTCCAGGGTAATAGTCTTTCCAGTG 4323425
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 4323424 AGGGTCTTGACGAAGATCTGCAT 4323402
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| || || || || || ||||| |||| ||||| | || || || ||||||
Sbjct 4323376 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGC 4323317
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| |||||||| || || || ||||| || || || || || ||||| || || ||
Sbjct 4323316 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 4323257
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || || |||||||| ||| || || ||||| || | ||||| || ||
Sbjct 4323256 GACTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTG 4323197
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 4323196 AGGGTCTTGACGAAGATCTGCAT 4323174
Score = 113 bits (124), Expect = 1e-19
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||||||||| || || || ||||| || | || || | ||||| || |||||
Sbjct 4323149 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCCAGCTG 4323090
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| ||||| ||||| || ||||| || || ||
Sbjct 4323089 CTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 4323030
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || || |||||||| || || || || | ||| | ||||| || ||
Sbjct 4323029 AGACTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGT 4322970
Query 195117 CA 195118
||
Sbjct 4322969 CA 4322968
Score = 107 bits (118), Expect = 4e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| ||||||||||| || || ||||| || | |||||| | ||||| |||
Sbjct 3064414 ACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCG 3064473
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||||||||| |||||||| || || || ||||| || || || || || ||||||
Sbjct 3064474 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCT 3064530
>seq10
Length=1051362
Score = 113 bits (124), Expect = 1e-19
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| ||| ||||| | ||||| ||||||||||| || ||||||||
Sbjct 358833 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 358774
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| ||||| || || || |||||||| || ||||| || || || ||||||||| ||
Sbjct 358773 AGACGTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 358714
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|||||||| ||| || || || ||||||| ||||| || |||| || || |||
Sbjct 358713 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 358657
Query 195130 AA 195131
||
Sbjct 358656 AA 358655
>seq12
Length=996256
Score = 100 bits (110), Expect = 6e-16
Identities = 186/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
|||| ||| | ||||| | ||||| ||||||||| | || | | ||| || || |||
Sbjct 676853 TTCTTCGCTCTGTGGACCCCTGATCTGTTCATGAAGCGTGTTGAGGCCAACGGTGACTGG 676912
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| || ||||| ||||| || || ||||| |||| || || || || ||||| ||
Sbjct 676913 ACTCTGTTCTGCCCCAACGAGGCCCCTGGTCTTGCCGACGTCTACGGCGAGGAGTTTGAT 676972
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768
|||| || || | ||||| || ||||| | | | ||| | | ||||| || |
Sbjct 676973 GCTCTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTAAGACCTTCAAGGCTCAGAAG 677032
Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828
|||||| || |||||| | || || ||| |||| ||||| || ||||||
Sbjct 677033 CTGTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTTTACAAG 677092
Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861
||||| | |||||||| ||||||||||||
Sbjct 677093 GATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 677125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109478358926876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |